[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Carassius auratus (goldfish): 113038687
Entry
113038687         CDS       T07313                                 
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03320  PPAR signaling pathway
caua04148  Efferocytosis
caua04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:caua00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    113038687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:caua03000]
    113038687
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:caua03310]
    113038687
Transcription factors [BR:caua03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    113038687
Nuclear receptors [BR:caua03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   113038687
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 113038687
NCBI-ProteinID: XP_026052077
Ensembl: ENSCARG00000010953
UniProt: A0A6P6J0C2
Position
21:complement(15654311..15804353)
AA seq 524 aa
MDPFCLDMHMGFLKPQCSIPPPPQRGRAEACTCFSGMCALHQRRLSTDLLIPRTPQCDDP
FRRTPFLKYKDSSGQVTASPLSSPTSHRGMHPSLLSPTSLGPSGSLHSPISSLNSPMNGL
GSPFSVISSPMGPHSMASPGMGYGPSISPQLNSPMNSVSSSEDIKPPLGINGVMKVPAQP
SGTPLSLTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKDCIIDKRQ
RNRCQYCRYQKCLAMGMKREVLLHTAVQEERQRAKERNENEVESTSSANEDMPVEKILEA
ELAVEPKTETYIETNVPMPSNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQV
ILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMR
DMQMDKTELGCLRAIVLFNPDSKGLSNPGEVEALREKVYASLEAYCKQKYPEQPGRFAKL
LLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggatcccttctgccttgatatgcacatggggttcctgaaaccccagtgctcgatacca
ccgccacctcagagaggacgagcagaagcatgcacgtgtttcagcggaatgtgtgccctt
catcaacgcaggctttctacagacttgttaataccaaggaccccccaatgtgatgatccc
tttagacggactcccttcctaaaatataaagactcctcgggacaggtgacagcctctcct
cttagctcacccacgtcccaccgggggatgcatccgtcactgctgagcccgacttcattg
ggcccctcggggtctctgcactcccccatcagctctctgaactcccccatgaacggcctt
ggctctcccttttctgtcatcagctcgcccatggggccacattccatggcgtcacccggg
atgggctacggccccagcatcagcccacagttgaattcgcccatgaactctgtcagcagc
tcagaagatatcaagccgcccctgggcatcaacggtgtgatgaaggtgccagcccagccc
tcgggcacccctctttccctcaccaaacacatctgtgccatctgtggcgaccgctcctca
ggtaaacactacggtgtgtacagctgcgaggggtgcaagggtttcttcaagaggactgtg
cgtaaggacctgacctacacttgtcgagacagcaaggactgtattatcgacaaacgccag
cgcaaccgctgccagtactgccgctatcagaagtgtttggccatgggcatgaagagagaa
gtattattacatacagccgtccaggaggagcgccagcgagccaaggaacgcaacgagaac
gaggtggagtcgaccagcagtgcaaacgaagacatgcctgtggagaagatcctggaggcg
gagcttgctgtggagcccaaaacggagacttacattgaaaccaatgtaccgatgccctca
aattcacccaatgatccagtcacgaacatctgtcaggccgcagacaagcagctcttcact
ctcgtggaatgggccaagaggatcccgcatttttccgagctcccgctggacgaccaggtc
attcttctacgagcaggatggaatgagctcctcattgcgtcattttcacaccgttcaata
gcagtgaaagatgggatactgttggccacaggactgcacgtgcaccggaacagcgcccac
agtgccggagtaggggccatatttgacagggtgctgacggagttggtgtcaaagatgaga
gacatgcagatggataaaacagagctaggatgccttcgagccatcgtcctcttcaatcca
gactccaaaggcctgtcaaacccaggtgaggtggaggcgctgagagagaaggtctatgcc
tctctggaagcctactgcaaacagaaataccctgaacaacctggaaggtttgctaagctg
ttgctgcggctccctgccctgcgttcaattggactgaagtgtttggagcatctgttcttc
ttcaagctcataggggacactcccatcgataccttcctcatggagatgctagaggcgccc
caccaaatgacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system