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KEGG   Magallana angulata (Portugese oyster): 128157138
Entry
128157138         CDS       T09348                                 
Name
(RefSeq) retinoic acid receptor RXR-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
canu  Magallana angulata (Portugese oyster)
Pathway
canu04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:canu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    128157138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:canu03000]
    128157138
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:canu03310]
    128157138
Transcription factors [BR:canu03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    128157138
Nuclear receptors [BR:canu03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   128157138
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 128157138
NCBI-ProteinID: XP_052675507
Position
7:20090965..20107099
AA seq 476 aa
MVANFKPIETESSLHGLWIPPITDSLDGVSSNSNMSTTANMGMGMSPSMGISSMAQMGSP
PDIKPDINSLVSQSFYPYGIQHPMSQSQASPGSQPMMSPGLHSPSSSVTSPSMMSIGSPG
SASSPPGSNPHMPHSNLNSKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACR
DDRNCIIDKRQRNRCQYCRYMKCLNMGMKREDVKCSTDAGRQGSSVQEERQRVKEKGEGE
VESTSTANSDMPVEKILEAELAVEPKTDTYIDAQKDTVTNICQAADKQLFTLVEWAKRIP
HFTELPLEDQVILLRAGWNELLIAGFSHRSIVVKDGILLATGLHVHRSSAHQAGVGTIFD
RVLTELVAKMREMKMDKTELGCLRAIVLFNPDAKGVSAVSEVEQLREKVYASLEEYCKMH
YPDEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLLEMLESPSPSST
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggttgctaatttcaaacctatagagacggaaagtagcttgcatgggttgtggattccg
ccaataacagattctctggatggggtaagcagcaactccaacatgtcaactactgctaat
atggggatgggaatgtctccatccatgggaatcagctcaatggcacagatgggatctcct
ccagacattaaaccagatatcaactctctagtgtcccagtcattttatccttatggaata
cagcaccctatgtcccagtcacaggcgtcccctgggtctcaaccgatgatgtcaccaggt
cttcactcaccctcctcctcagtaacatccccttccatgatgtccatcggttcccctggc
tcagcatcctcacccccggggtccaatcctcacatgccacacagtaatctcaatagcaaa
catatctgtgctatttgtggtgacagagcctctgggaagcactatggagtttacagttgt
gaaggttgtaaaggatttttcaaaagaacagttcgtaaggacttgacgtatgcctgtcga
gatgaccgcaactgtatcattgacaaaaggcagaggaacagatgtcagtactgccgatac
atgaagtgtctaaacatggggatgaagagagaagatgttaaatgcagcaccgatgcaggg
cgccaaggatcatctgtacaagaggaaagacagcgagtgaaggagaagggagagggggag
gttgagagcaccagcactgccaactcagacatgccagtagagaaaatcctggaggctgaa
ctagctgtggaacccaagacagacacctacatagatgctcagaaagatacagtgacaaac
atttgtcaggcagcagacaagcaactgttcactttggtggaatgggccaaacgcatacct
cacttcaccgagttgcctctagaagatcaggtcattctactgcgtgcaggttggaatgag
ctgctgatagctggcttctcacatcgatctatcgtggtaaaggatggtatactgctggcc
accggcctccatgtacacaggagcagcgctcaccaagcaggtgtcggaaccatatttgac
cgtgtcctcacagaacttgtcgctaaaatgcgggaaatgaaaatggataagacagagttg
ggatgtttaagagctatcgtactgtttaatccagatgctaaaggtgtatctgctgtctct
gaagtggaacagttgagagagaaagtgtatgcttcactggaagaatactgcaaaatgcac
taccccgacgaaccaggcaggtttgccaaattactgcttcgattgccagcgctcagaagt
atagggctcaagtgtttggaacacttattcttcttcaaattaattggtgatactcccata
gacactttccttctagaaatgttggaaagtccatccccaagcagcacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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