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KEGG   Clinocottus analis (woolly sculpin): 137780985
Entry
137780985         CDS       T10471                                 
Name
(RefSeq) collagen alpha-6(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana04510  Focal adhesion
cana04512  ECM-receptor interaction
cana04820  Cytoskeleton in muscle cells
Brite
Exosome [BR:cana04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   137780985
Glycosaminoglycan binding proteins [BR:cana00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137780985
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   137780985
SSDB
Other DBs
NCBI-GeneID: 137780985
NCBI-ProteinID: XP_068425551
Position
Unknown
AA seq 2395 aa
MSFGLLCLRAEGTDAADLRRSSSMKGRTSLLLVLLIAACSSGSAALTKDCKHATLADIVF
LVDGSTSIGKENFQEVRQFLRSVVNGLDIGPNKVRIGLAQYSDEAIVEFLLKDHMDKNSL
LAAVDALSHQTGSTKTGKAITFLQNNYFTEGAGSRARKRVPQIAVVITDGDSTDDVIEPT
KSLRDHGVLVFGVGVGKANRTVIEFIANRPPHLFLSSIANYQDLQMLKDSLLKNVCMFME
YQRQALAEKFKDIYFLVDSDMSPENFKKFKKYLGKLVADLNVGASAYRIGLAQYGEDTKI
EFNLSSYQTKRETLNAIKRWLQQPKGKRKLGSALKYAKSHFFTSEAGSRAEQGTPQSLLV
VSGGPSNDYVSEAAQKIKSAAITVYGISAGATESELNLFASAGYIFNSLDELNLKNFLMA
EKTESITQDCKEANMADIVFIVEESGSNETNNFQLVRTFLHSVVSGLEVSPSRVRVGIVT
YNETSTAQVYLNTFNDKKELLKFIKILPYRGGGTNTGAALEFTLEKIFIEEKGSRKEKGN
GKGKGAQQVAVVITEGKSQDSVSNASLNLRRAGVTVFAVGIKKANKTELEVIASHPSNKF
VFNVDSFIELEPVKQSLQKTLCNNIIDQAFSVVKMETSNRKACEQKEEAEVFFLIDDSGS
IWPNDFNDMKNFIVQFLHNFRIGSEHIRVGLVKYADSPTQEFDLTTYSDAESLEKAVLGI
EHKGGGTETGKALSVMGPYFERAVATRGHKVPEYLVVITDGASSDKVKAPAESIRAQGVV
VYAIGVKESNQTELVEIAGDPKNTFYVNNFDALKSINNDIIRDICTEDDCRDARGDVFFL
TDSSESISKNDFKTMKEFIKTVIKRSTIGEDKVRFGLMQFSTNLKLEFSLDSFYNIEDIL
SAVDEMQQIEEGTCTGKALKAVSQYFDATRGGRPDTSQRLVVITDGEAKDDVKGPAQALR
AKGVVVYAIGLADAKTTQLVEISGSSDTVYVKKNFDALKDLESQLAVEFCNKDCKLEKAD
VIFLVDSSKSIYQSEYENMRTFMESVVNQTTVGKDHTRFGLIFYSTSFVSSFSLKDFDSK
RKIRAAIPKEKPLNNDTYTSKALKSSLQFFNAEHGGRRADKVPQILMVITDGKATDHERL
NETSNALRSNGVLVASIGVKDAKMKELMTMAGGDASKVFYVDNFGALENLTRNMSSVFCI
KRACEKADLVFLLDRSGSINSTNYNIIKNFTTNLVNSFDVSENFVHVGLAQFSEDPQYEF
DLNTYFKKEDCISHIQGMSYKGGNTNIGRALDHIKDYFQVSRGSREEIPKILVLLSDGDS
HDEVRAAGRRLRNLGITVFAIAVGDVHLLQLLQITGTPENLFRVQNFIDLANIKQEVVDN
ICKDDPIVLPPTPAPTPQPNRGCSIDIAMGFDISRENRAPGEMLISGHAKLQAFLPEIAR
YVSSVAGLCCVGPQPVKTNIAYQVLSRDGRSLYDFNFEAYSRDVVNKVMNLSLAEPTYFN
ANLLKAFGKKLSAQSEAGVKVLVIFSDGLDEDVMKLEQESELLRQSGVSALLTVALEGTR
DPAQLQMVEFGRGFGYKLPLSIGMAGVGNTVLQQIDSVLSRECCNVPCRCSGHEGVQGVR
GPRGSKGTSGQKGNLGFIGEEGISGERGLPGPHGRQGSIGCPGTRGEKGFRGVSGHRGGS
GADGLDGVHGEQGLAGSVGARGQRGDPGKPGVPGTRGEAGLKGQRGLRGDPGEPGADTTS
PGAKGDPGNPGLPGLPGLNGGPGGDGDTGNPGPDGRKSLVGEPGVPGEPGDPGLQGSPGA
SGPQGNRGESGDRGPKGLSGFPGRQGEPGPAGGPGLAGRHGANGQKGQPGNPGVKGAPGS
RGPRGPPGQDGEDGYGPPGPQGAKGDPGFPGYPGLQGENGQEGTKGYPGPKGNQGRGGNS
GGPGASGGPGDPGPPGHTGPRGLPGGKDMTECQLINSIRDHCGPSECPAFPTELVLGLDM
SEDVTPAAFEKQRSVLLSLLENITVSESNCPTGARVAVVGYSAYTKYLIRFQDYHRKTQL
MESVKNIALERTSNRRQLGAAMRFVGQNVFKRVRAGTTMRKVAVFLSNGPSPDVTDIVTA
MMEYRALGIVPAVISLRNAPAVERAVELDDSGRSIFSVLGTDPTADLQKVQKCAVCYDPC
QRLPQCAFIQDPVQPQEVDMDLVLVVDGSREVQADEYAGVQQLLGSVVEQLVVSPQPRRA
GKQARVAVVQQGGAQDTKVGFGLGTYQTSALMRKHLIRNMTQLGGPSALGRTLEFTLKEV
LLKAGQPRRRRVLLTVVGTQTAHEDRAKLRYISQKAKCEGAALFVVTVGDRYDRTQVEEL
ASLPVHQHLIHMGSLKTEEQGYAQRFFRVFLSALNKEMNKYPPVLLKKTCKQLTD
NT seq 7188 nt   +upstreamnt  +downstreamnt
atgagctttggactcttgtgtctgagggcagaaggaactgatgcagcagatctaaggaga
agctccagcatgaagggcagaaccagtcttctcctcgttctcctcatagcagcgtgttcc
tctgggtccgctgctctgacaaaggattgtaaacacgccacactggccgacatcgtcttc
ctggtcgacggctccaccagcatcggcaaagagaactttcaggaggtccgtcagtttctc
cgcagcgtagtcaacggcctggacatcggccctaacaaggttcggatcggcttggctcag
tacagcgatgaagctatcgtggagttcctgctgaaggatcacatggacaagaactccctg
ctggctgcagtggacgcgctttcccaccaaaccggaagcacgaaaacggggaaggccatc
acatttctccaaaataactatttcacagagggcgcgggcagccgagccagaaaacgggtg
cctcagatcgctgttgttatcacggacggagactccacggacgatgtgatagagcccacc
aaaagcctgagagatcacggcgtcctggtgtttggcgtcggggttggaaaagccaaccgg
acagtgatagagttcatcgctaaccggcctccacatctcttcctgtcctccatcgcaaac
taccaggacctgcagatgctgaaagacagtctgctgaaaaatgtttgcatgtttatggag
taccagaggcaagctttggccgagaagtttaaagatatttacttcctggtggacagtgac
atgtctcctgaaaacttcaagaagttcaagaagtacttaggcaaattagtcgctgacctt
aacgtcggcgcgtccgcctaccgcatcggtttggcccaatacggggaagataccaagatt
gagtttaatctcagctcttatcaaactaaacgggaaacactgaatgctatcaaacgttgg
ctccaacaacccaaaggaaagcgaaaactgggcagtgctctgaagtatgccaaaagccac
tttttcaccagcgaggcgggcagccgtgcagagcagggcactccgcagtccctgctggtc
gtgagcggaggaccgtccaatgattatgtgtctgaggccgctcaaaagatcaaatcagca
gcgataactgtttatggaataagtgcaggtgcaaccgaaagtgaattaaacttatttgcc
agcgctgggtacatattcaattctctcgacgaacttaatttgaagaatttcttgatggct
gagaaaactgagagcattactcaagattgcaaagaagccaacatggccgacatcgtgttc
atcgttgaagagtcaggaagcaatgagaccaacaacttccagctggtgcgcactttcctc
cactcggtcgtgagcggcctagaagtcagtccctctcgagtccgagtgggcatcgttacg
tacaacgagacttccacagcacaggtctacctgaacaccttcaatgacaagaaggagttg
ctgaagttcatcaagatcctgccttatcgtggaggcggtacgaacactggagcggcttta
gaattcaccttggaaaaaatcttcattgaggaaaaggggagtaggaaagagaagggcaac
gggaaaggaaagggtgcccagcaggtggcggtggtgatcacagagggcaaatcccaggat
agcgtgagcaatgcatccctcaacctccgccgagccggagtcaccgtcttcgctgtcgga
attaaaaaagccaacaagactgaactggaggtgattgcgtctcacccctccaataagttt
gtcttcaatgtggacagcttcattgagctggagcccgtgaagcagagcctgcagaaaacc
ctgtgtaacaacatcattgaccaagctttctcagtcgttaaaatggaaacgagcaacaga
aaagcatgtgagcagaaagaagaagcagaagtcttcttcctgatcgatgactctgggagc
atttggccaaacgacttcaacgacatgaagaacttcatcgtccagtttctacataacttc
cgtatcggttcagaacacatccgcgtggggctcgtgaaatatgctgattcaccaactcaa
gaatttgatctgacaacctactcagatgccgagtcattggagaaagccgtcttgggtatt
gaacacaaaggaggtgggaccgaaacaggaaaagctctgtcagtcatgggcccgtacttc
gagagagccgtggccactcgtggtcacaaagtcccagagtacctggtggtcatcacggat
ggggcatcctccgataaggtgaaggctccagctgaaagtattcgtgcgcagggcgtcgtc
gtctacgccatcggggtgaaagagtcaaaccaaactgagctagtagagattgccggcgac
cccaagaataccttctatgtcaataactttgatgccttgaaatccatcaacaatgacatc
atcagagacatctgtactgaagacgattgtagagatgcacgtggcgacgtctttttctta
actgacagctctgagagcatctctaagaacgactttaagaccatgaaggagttcattaaa
actgtcatcaagaggtccaccatcggggaggacaaggtgcggttcggtctcatgcagttc
agcaccaacctcaagctggagttctccctggacagcttctataacatagaagacattctg
tcagccgtcgatgaaatgcagcaaatagaggaaggtacgtgcacaggaaaggccctgaaa
gcggtgtcgcagtactttgatgcaaccagaggagggcgtcctgacacgagtcagaggctg
gtagtgataacagacggcgaggccaaagatgacgtcaaaggccccgcccaggctctgagg
gccaagggagtggtggtctacgccatcggcttggcggacgccaagaccacccagctggta
gagatcagtggttcatcggacacagtgtatgttaagaagaactttgacgctctgaaggac
ctagaaagccagctggccgtggagttctgcaataaagattgcaagctagaaaaagctgac
gttattttcctggtggacagctccaaaagcatatatcaatcggaatatgaaaatatgcga
acgtttatggagtcagtagtaaaccaaaccacagttggcaaggaccacactcgttttggg
ctcatcttttactccactagttttgtgtcttcctttagtctcaaggactttgactccaaa
cgaaaaattcgggcagcgatccccaaagagaagccattaaacaatgatacctacacgagc
aaggccttgaagtcctcgctccagttctttaacgctgaacatggcggccggagagcagac
aaagtgcctcagattctcatggtgatcacagacggtaaggccaccgaccatgaacgatta
aatgagacatcgaacgcactgagaagcaacggggtcctcgtcgccagcatcggagtgaag
gacgctaaaatgaaagagctgatgaccatggccggcggcgacgcctcgaaagtgttctac
gtggacaattttggagcacttgaaaatctgaccagaaacatgtcttctgtcttctgcatc
aaacgcgcttgcgagaaggccgacctggtcttcctgctcgatcgctctggcagtatcaac
tcaaccaattacaatatcataaaaaacttcacaacaaacctggtgaacagctttgacgtc
agtgagaactttgtgcatgttggacttgctcagttcagcgaggaccctcaatatgagttt
gacctcaacacgtacttcaagaaggaggattgtatctcacacatccagggcatgtcatac
aaaggtggaaacaccaacatcggaagggccttggatcacattaaggattacttccaggtg
tcgcggggcagccgcgaggagatccccaagatcctggtgctgctctcagatggtgattct
cacgatgaggtgagggcggcgggtaggcggctaaggaatctggggatcacggtgttcgcc
atcgctgtcggagacgtccacctcttgcagctcctgcagatcaccggcactccagagaac
ctgttcagggtgcagaacttcatcgacttggcaaatatcaagcaggaggtggtggacaac
atttgcaaagatgatcccattgttctgccgccgacacccgccccaacaccccaacccaac
cgaggctgcagcattgatatcgccatgggattcgatatttctcgtgagaacagagctcct
ggcgagatgctgatcagcggccacgccaagctccaggccttcctgccagagatcgcccgt
tacgtctcttcggttgcaggtctgtgctgcgtcggtccgcagcctgtgaagaccaacatc
gcctatcaagtgctgagtagagatggacgctccctctacgacttcaactttgaggcctac
agcagagacgtggtgaataaagtcatgaacttgagtttggcagagcccacctacttcaac
gccaacctgctgaaggccttcgggaagaagctcagtgcccagtccgaagctggcgtgaag
gttctggtgatcttctcagacggactcgatgaggacgtgatgaagctggagcaggaatca
gagctgctgcgacagtctggggtcagtgctctgctgacggtggctctggaggggacccgg
gacccggcccagctgcagatggtggagtttggacgaggattcggctacaagcttcctctc
agcatcggcatggcgggcgtcggcaacaccgtcctgcagcagattgactcggtgttgtcg
agggagtgctgcaacgtcccatgcagatgttcgggacatgaaggcgtccaaggcgtccga
ggcccccgggggtcaaagggtacgtcgggacagaagggtaatctgggcttcattggagag
gagggcatctctggtgagcgggggcttcctggaccacatggacgtcagggctcgattggc
tgtcctggaaccagaggagagaagggcttcaggggagtttcgggccaccggggcggcagc
ggagcagacggactggacggagtccacggagagcagggactcgcaggatcagtgggagct
cgaggacagagaggagaccctggaaaaccaggcgtcccgggaaccagaggcgaggcgggg
cttaaaggacagcgaggactcagaggagatccgggtgaaccaggtgctgataccaccagt
ccaggagccaaaggggaccccgggaacccaggtctaccggggttacctggactgaacgga
gggccaggtggcgatggagacactggcaacccgggtccagacgggaggaaaagtctggtg
ggggaaccgggtgtacctggagaaccaggggatccaggacttcaaggcagcccaggtgcg
tctggtccacagggaaacagaggggaaagcggtgatcgtggtccaaaaggactctctggt
tttcctggacgtcagggtgaaccgggaccagctggaggcccgggactcgccggacgccat
ggagctaacgggcagaagggtcaaccaggaaacccgggtgtgaagggggcgcctggatcc
agaggacccagaggaccgccgggccaagacggagaagatggttatggtcctccaggaccc
caaggggccaagggagatcctgggttccccgggtatcctggtctacagggggagaatggt
caggagggaaccaaaggatacccgggtcctaaagggaaccagggtcgaggggggaactcg
ggcgggccgggagcctccggagggccaggagacccaggacccccgggtcacactggtcct
agaggtcttcccggaggcaaagacatgacggagtgtcagctgatcaactccatcagagac
cactgtggtccgtcagagtgcccggccttccctaccgagctggtgctaggtctggacatg
tcggaggacgtgaccccggcggctttcgagaagcagcgctccgtcctcctgtccctgctg
gagaacatcaccgtctccgagagcaactgtccgacgggcgcccgtgtggcggtggtgggc
tacagcgcctacaccaagtacctgatccgcttccaggactaccaccgcaagactcagctg
atggagtctgtcaagaacatcgccctggagaggacgtccaaccggcggcagctgggggcc
gccatgcgcttcgtgggccagaacgtcttcaagcgcgtccgagcaggaacgacgatgagg
aaggtggctgtcttcctctctaacgggccgtccccggatgttaccgacatcgtcaccgcc
atgatggagtaccgggccctcggcatcgtcccggcggtcatctctctgaggaacgctcca
gccgttgaacgagccgtggagttggacgactcaggaagatccatcttcagcgttctgggg
acagacccgactgctgacctgcagaaggtccagaagtgcgccgtctgttacgacccctgc
cagcgtttgcctcagtgcgccttcatccaggacccagtgcagcctcaggaggtggacatg
gacctggtcctggtggtggacggctccagggaggtgcaggctgatgagtacgccggtgtc
cagcagctgctgggctcggtggtggaacagctggtcgtgagcccgcagccccgcagggcc
ggcaaacaggcccgggtggccgtggtccagcagggcggcgcccaggacaccaaggtaggg
tttggcctcgggacctaccagaccagcgccctgatgaggaagcatctgatccggaacatg
acgcagctgggaggcccgtcggcgctgggacggacgctggagttcactctgaaggaggtg
ctgctgaaagccggccagccccgcaggaggagggtgctgctgaccgtggtgggcacccag
acggctcacgaggaccgagccaagctgcgctacatctcccagaaggccaagtgtgagggg
gcggcgctgttcgtggtgacggtcggagatcgctacgaccggacgcaggtggaggagctg
gccagtttgccggttcaccagcacctgatccacatggggagcctgaagacggaggagcag
ggctacgcccagcgcttcttcagggtcttcctctccgccctcaacaaggaaatgaacaaa
tatcctcctgttctgttgaaaaagacctgcaaacagctgacagattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
All databases (11)   

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