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KEGG   Cyprinodon variegatus (sheepshead minnow): 107092636
Entry
107092636         CDS       T06110                                 
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cvg04040]
    107092636
Ion channels [BR:cvg04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   107092636
SSDB
Motif
Pfam: Ion_trans IQ_SCN5A_C Na_trans_assoc PKD_channel GPHH BLF1
Other DBs
NCBI-GeneID: 107092636
NCBI-ProteinID: XP_015242706
Ensembl: ENSCVAG00000012101
Position
Unknown
AA seq 1431 aa
MLVDQPLMGMVVECVLLSIFTLELLVKFLSRGVGFGQFTSLRDPWNWLDILNITVTVFFL
CDPFNGLDALRTISRVLKLFSYRPGLKKTVEKLVHSLKELADVMVLGVFVLSILTVLGMQ
LFMGQLSNRCVMSSPSGMNDTPTPWPYANPNSSEEFAFEDFLCGNSSYARECPDSLCLRL
GKNPDHGFTSFDTFGWSLLSVLRILTQDLFDRLMKMTLEVTGKPYVSAYVLIFFPGCFVV
VSLIVAAVAILLVKQEDAEAAEAKKAEKEYNRIVKVLKKKEEKEATDGTELLEDLDSAHR
KKPAANTKEQEPLPGEDDVDKVKPLCSSHWNRVLENDCCSCSQWLKQKLRPIVMNRFFEL
GIIICIILNTILMAMEHYPMTPEFENLFLLNKVFLAIYVAEFLLKLLALGVKGYFQVRWH
IFDFIIVLSGLLLLMIADVQGLWVLRSVQLLVPLRLGRWWRTLNLLMKITWFSFGNLSRV
LFLTFFMFAMVGMKLFKDDDYLELPDWHMDDFVHSILLVFRILCGEWIETMWDCMLVSND
GLCVVYFMLVVFIGNLLVLCLFLSLLLSPLYAKASGGAEGQETNKSQSGPWVPEFFRTLI
GKNLCVDTDQKATSKTNGKEDYLALTVATSEQPFLRDPSNDSTKIQKAANNKENKQECDG
VQKSLDNRNLTKNTPGDCCCSVCYNCFSIQDIDTSQGSGKVWFKFRKACLLIVQHRVFEV
FMIFIILLSSAALVLEDTLIEPNEVMQEVLDKADLVFTCLFLTEMLLKWIALGFKQYFTS
FWCWLDFLVLDVSMFGLIGKTLGYSSNSLKTLRALRTLRVPSRFKGMRVVLQSIAASVPS
MCSALLVVLFVWLNFSIMGVNLFAGKFYSCFNVTTKERMDWHHIANKTDCLYIQENNTDI
CWRNEQFNFDNVGMAFLSLLVMATSAGWKDIMHDAVDSTQVEDQPQFEYRLNMYLYFVLF
IIFGCFFCSNLLIRACIDALHKQNKKAGGKHVLRTEQQLKFHVTVGKIFPKSPEKAAPRP
QNRCIARLFDLVTAPTFEILVVVVICVKVLLMMMERDDQSMLAYNVMMWFHFIIMILFLI
EFILKIIALRQHYFSFGLNILDFVVLIYMILGSFFHDIFEKYLITDIFILRLLRISRVLP
LIPWTKRLQKLIIGFIMSIPALLNIGLVIFLVVYTYSFVGMCTFCTAVMECWLYNFDTFG
NSMISMITVTTSSHWNCFLYSIMEEPVEYDLKTPDSSSDFGRPYTGIFFFSSYMLLYLLL
VIHLFIAVVMESFNSIKSEDSNLLQMFYKTWRKFDPNALQVIQYTELSDFCDALPAPLRI
PKPNSIQLNHMDLPLLAGDQICCFDVLRALMTQAFGESAETEALQARLKEKFNNAEKVSR
EPVSSTLKRKQEQVAAAVIQRAFRKHQVQNRADETPDQAVGETTDVLVSSH
NT seq 4296 nt   +upstreamnt  +downstreamnt
atgctggtcgaccagccattgatgggaatggtagtggagtgtgtgttgttaagtatcttc
acccttgagctcctcgtgaagtttttgtccagaggcgtgggctttggacaattcacctcc
ctcagggatccctggaactggctggatatcctcaacatcacagtgactgttttctttcta
tgtgatccttttaatggattagatgctttgagaaccatttctcgtgtattgaagctcttc
agctacagaccaggtctgaagaagacggtcgaaaagcttgtgcattcactcaaggagctg
gctgatgtcatggtccttggggtatttgtcctgagtatcttaactgtgcttggcatgcag
cttttcatgggtcagttgagcaataggtgtgttatgagctcaccatctggaatgaatgac
acaccaaccccttggccctatgcaaaccccaactcttctgaagagtttgcttttgaagac
tttttatgtgggaacagctcatatgctagggagtgtccagattccctttgtttaagactt
gggaagaacccagaccacggattcaccagctttgacacatttggttggtctctgctgtct
gtgttgagaatattgactcaggacctcttcgataggcttatgaaaatgactttggaagta
acaggtaaaccctatgtgagtgcctatgtgctcatattctttcccggatgttttgtggtg
gtaagcctcattgtggcagcagttgcgatattgctggtgaaacaagaggacgctgaggct
gctgaagccaaaaaagctgaaaaagagtacaatcgaattgtaaaggtgctaaagaagaaa
gaggagaaggaggccacagatgggacagagctcttggaagatcttgattcagcacatagg
aagaaaccagcagcaaatactaaggaacaggaacctctccctggggaagatgatgtggat
aaagtcaagcctttgtgcagctctcattggaacagagtcctggagaatgactgctgcagt
tgctcacaatggcttaaacagaagctccgtccgattgtgatgaatcgtttttttgaacta
ggaataataatttgcataatcttaaacactatcctcatggccatggaacattatccaatg
acacctgaatttgaaaatctgttcttgctgaacaaggtgtttcttgcaatctacgtagca
gaatttctacttaagcttttggccctgggtgttaaaggctacttccaggtgagatggcac
atatttgacttcatcattgtcctctctggactgttgcttcttatgatcgcggatgtgcag
ggactatgggtgctgagatcagtacaattgctggtaccactgaggttgggacgttggtgg
cgcaccttgaacctgctgatgaagatcacctggttttcatttgggaatctcagtcgcgtt
ctatttttgacattcttcatgtttgcaatggttggcatgaagctctttaaggacgacgac
tatcttgagcttccagactggcacatggacgactttgtgcactccatcttgcttgtcttc
agaatcctctgcggagagtggattgagaccatgtgggactgcatgctggtttccaatgat
ggcctttgtgtcgtctacttcatgttggttgtgttcattggaaacctgctggtgctgtgt
ctgtttctttctctcttgttgagcccattgtatgctaaagcatcaggaggtgcagaggga
caagaaacaaataaaagtcagagtggaccatgggtcccagagtttttcaggactttgata
ggaaaaaatctgtgtgttgacacagatcagaaagccacgtctaagaccaacggcaaggaa
gactatctggcattaacagttgccacgtcagaacagccattccttagagatccaagtaat
gattcaaccaaaatccaaaaagcagcaaataacaaagagaataagcaggaatgtgatggg
gtgcagaagtctctggacaacagaaatctgacaaaaaacacacctggagactgctgctgt
tcagtttgttacaactgcttttcgatccaggatatagacacatcccagggttctgggaag
gtgtggtttaagttcaggaaggcatgtctcctcatcgttcaacacagagtgtttgaagtc
tttatgatcttcatcatcctgcttagcagcgctgctttggtcctagaagacacactcata
gaacccaacgaagtcatgcaggaggtgctggacaaagcagacctggtgttcacctgcctg
ttcctgacagaaatgctgctgaagtggattgccttgggattcaagcaatacttcactagc
ttctggtgctggcttgacttccttgtcttagatgtctctatgttcggtttgattggtaaa
acactgggatactccagcaattcgctaaagaccctgagggccctgaggaccttgagggta
ccatcccgcttcaaaggcatgagggtggtgcttcagagcatagcagcaagtgtcccctcc
atgtgcagcgcactgctggttgttctgttcgtgtggttgaacttcagcatcatgggagta
aatctgtttgcaggaaagttttactcctgttttaatgtgaccacaaaagaaagaatggat
tggcatcatatcgcaaacaagacagactgtctttacattcaggaaaacaacactgatatc
tgctggaggaatgaacagttcaactttgacaacgtgggcatggctttcctttcactgctg
gttatggcaacatcagcaggctggaaagatatcatgcatgatgctgtggactccacacag
gtggaggaccagccacagtttgagtacagactgaacatgtatctgtactttgtccttttc
atcatcttcggctgcttcttctgctccaacctcctcatcagggcctgtattgatgctctc
cataagcagaataaaaaggctggagggaaacatgtcctcaggacggagcagcagctaaag
tttcatgtaactgtaggaaagattttccccaagtcacctgagaaggctgctccacgccca
cagaaccggtgcattgctcgcctgtttgatctggtgactgccccaacatttgaaatcctg
gttgtggtagtaatttgtgtgaaagtgttgttgatgatgatggaaagggatgatcagtct
atgctggcatacaacgtaatgatgtggttccacttcatcatcatgattcttttcctcatc
gagttcatcctgaaaatcattgcactaagacagcactacttcagctttggcctcaacatc
ttggactttgtagtcctgatctatatgattttaggatccttctttcatgatatctttgag
aagtatctcataacagatatctttattcttcgactgcttcgaatcagcagagttctccca
ttgatcccctggaccaaacggttgcagaagctgatcattggctttataatgtctattcct
gccctcctcaacattggcctagtcatcttccttgtggtgtacacctattccttcgttggg
atgtgtactttttgcactgcggtgatggagtgttggctttacaactttgacacatttggg
aacagcatgatcagtatgattaccgtcacaacctcctctcattggaactgttttctgtat
tccatcatggaagagcctgtagaatatgacttgaagacacctgactcatcttcagacttt
ggccgcccatacacaggcattttctttttctcatcctacatgctgctgtacctgctgctg
gttatccacctcttcattgcagttgtcatggaaagcttcaacagcatcaaatctgaggac
tctaatttactgcaaatgttttacaaaacctggaggaagtttgatcctaatgccttacag
gttatacagtacactgagctgtctgatttttgcgatgctcttccagctccactgaggata
cccaaaccaaacagtatccaactgaaccacatggatctgcctcttcttgcaggagaccag
atctgctgctttgacgttctacgagcactcatgacacaggcatttggtgaatcagcagag
actgaagctcttcaagccagactgaaagaaaagttcaacaacgcagaaaaggtgtctcgt
gaaccagtcagcagcaccctgaagagaaaacaggaacaagtggcagcagcagtgatccaa
agagccttccggaaacaccaggtgcaaaatagagctgatgaaactccagaccaggctgtg
ggagaaaccacagatgtgttggtgtcttcccattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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