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KEGG   Cuculus canorus (common cuckoo): 104068016
Entry
104068016         CDS       T08597                                 
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K11409  histone deacetylase 9 [EC:3.5.1.98]
Organism
cuca  Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cuca03036]
    104068016 (HDAC9)
Enzymes [BR:cuca01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104068016 (HDAC9)
Chromosome and associated proteins [BR:cuca03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     104068016 (HDAC9)
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 104068016
NCBI-ProteinID: XP_053914832
Position
2:complement(128711324..129170297)
AA seq 1088 aa
MHSMISSVDVKSEVPVGLEPITPLDLRTDLRMMVPMVDPIMREKQLQQELLLIQQQQQIQ
KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQELER
HRREQQLPPLRGKERGRERAVASTEVKQKLQEFLLSKSATKDSPANGKNHSVSRHPKLWY
TAAHHTSLDQSSPPLSGASPPYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAER
RSSPLLRRKDGNVVSSFKKRLFEVTESSVSSSSPGSGPSSPSNGPTSSITENETPVFPSN
IQAEHLVSQQRLLIQDESVNLLSLYTSPSLPNITLGLPAVQPQISGVRDCSRKSNSFPLL
QASSSFKEKQKGETQSLRQGVALAGQYGGNIPSSSTHPHVALEGKPNSSHQALLQHLLLK
EQMRQQKLLVTGAVPLHPQSPLAAKERVSPGIRAAHKLPRHRPLNRTQSAPLPQSTLAQL
VIQQQHQQFLEKQKQYQQQIHMNKMLSKSIEQLKQPGSHLEEAEEELHGDQSMQEERPSA
SGASVRAESSSAGVDDRIGQQVGAVKVKEEPPDSDEDVQTQQMESGEQAAFMQQEFPAHQ
RVHQLQIYQAQMATVGMAGLDKHRPVSRTPSSPTDSTLPHPAVDQPSQLVYTTGVVYDSL
MLKHQCMCGNYTNHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQLVHSEHHSL
LYGTSPLNRQKLDPRKLLGNVTQKLFSLLPCGGLGVDSDTVWNELHSAGAARMAVGCVIE
LAARVASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLD
VHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGYNINIAWTGGLDP
PMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQL
LKLADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVHQIPNMNAIASLKKT
TEIQSKYWKSVEPYSVPVDCALAESQKQEREETETVSAMASLSVDVEQCILQEGSRAAVE
PMEEEPAL
NT seq 3267 nt   +upstreamnt  +downstreamnt
atgcacagtatgatcagctcagtggatgtaaagtcagaggttcccgtgggattagagcct
atcacaccattagacttacgaactgatctcaggatgatggttcccatggtggacccaatt
atgcgtgaaaagcagcttcagcaggaactacttctgatccagcagcagcagcaaattcag
aaacaactgctgattgcagagtttcaaaagcagcatgaaaacctgacccgacagcatcag
gcccagctccaggaacacataaagttacaacaggaactcctagctattaagcaacagcaa
gaactccttgaaaaagagcagaaactggagcagcagagacaagagcaggaactggagagg
catcgcagggaacaacagcttcctcctctccgaggcaaagaaagaggccgagaaagggca
gtggccagtacagaagtgaagcagaaacttcaagagttcctgttgagtaaatcggcaaca
aaagactctccagcaaatgggaagaatcattccgtgagccgccaccccaagctctggtac
acggctgcccaccatacctcactggatcaaagctctccacccctgagtggggcctcacca
ccatacaaatacactttaccaggagcgcaagatgccaaggatgattttccacttcgtaaa
acagcttcagagcccaatttgaaagtacgttcacggttaaaacagaaggtggcagaaagg
agaagcagtcctttactcaggaggaaggatggaaatgttgtcagctcattcaagaagcga
ctgtttgaggtgacagaatcctcggtcagtagcagctcccctggatcaggtcccagttcc
ccaagcaatggtccgaccagcagtataacagaaaatgaaaccccggtttttccatctaac
attcaagctgagcatctggtttcacagcaacgccttttgatacaggatgaatcggtgaac
ttgttgagtctgtacacatccccttctctgcccaacattaccttgggacttccagcagta
caacctcaaatcagtggagtcagggactgctccaggaaaagtaatagcttcccactacta
caggcttcatcgtcattcaaagaaaagcagaagggcgagacccagtcgctcagacaagga
gtggccttggctggacagtatggggggaacattccttcatcctcaactcatcctcacgtt
gctttggagggaaagccaaatagcagccaccaagctctcttgcagcatctgttactgaaa
gaacaaatgagacagcaaaaactgcttgtgactggagcggttcctcttcatccacaatct
cctttagcagcaaaggagagagtctcacctggcataagagctgctcacaaactgcctcgt
cacaggccactgaatcgaacccagtcagctcctcttcctcagagtactttggctcagctg
gtcatccagcagcagcatcaacagtttttggagaagcagaaacaataccagcagcagatc
cacatgaataagatgctttctaaatccattgagcagctcaagcagcctggaagccacctg
gaggaagctgaagaagagcttcacggagatcaatcaatgcaggaagagcgaccttctgcg
agcggtgccagcgttagggctgagagcagcagtgctggtgtggatgacagaataggacag
caggtgggggctgtgaaagtcaaagaggagccaccggacagtgatgaggatgttcaaacc
cagcaaatggaatctggggagcaagctgcttttatgcaacaggagttccctgcgcatcag
cgtgtccaccagttgcaaatctaccaggctcagatggctacagttggcatggcaggatta
gataaacatcggccggtgtccaggaccccatcttcccccactgattccacattacctcac
ccagccgtggaccagcccagccagcttgtctacacgactggtgttgtgtatgacagtctg
atgctgaagcaccagtgtatgtgtggcaactatactaatcaccctgaacatgctggaagg
atccaaagcatctggtcaaggctgcaagaaactgggttgctaaacaagtgtgagcgaatt
cgaggtcgaaaagccagtctggaggaaatacagctggttcactctgaacatcattcactg
ttgtatggcaccagccccctgaacagacagaagctggaccccaggaaactcctaggaaat
gtgactcaaaaactcttttcgttgttgccttgtgggggacttggggtggacagtgacacc
gtttggaacgagctgcactcggccggggcggcacgcatggcggtaggctgtgtcatcgag
ctggcggcccgcgtggcctcccgggagctgaagaatggctttgctgttgtaaggccccca
ggccatcatgctgaagaatcaacagccatgggattctgcttttttaattcgattgcaatt
actgccaaatacttgagagacaagctaaatatagggaagatattgattgtagatctggat
gttcaccatggcaacggtacccagcaggctttttatgctgaccccagcatcctgtatgtt
tccctccatcgctatgatgaaggcaacttctttcccggcagtggagccccaaatgaggtt
ggaagtggccctggtgaagggtacaacataaatattgcttggacaggtggcttggatcct
cctatgggtgatgttgagtatctcacagcattcaggactgtgattatgccagctgccaat
gagtttgatccagagattgtcctggtgtcagcgggatttgatgccgtggaaggccacgac
cctccactgggcgggtacaaagtcacagctaaatgttttggtcacctaaccaagcaattg
ctgaagctagcggatggccgtgttgtgctggcactggaaggaggacatgaccttactgcc
atctgtgatgcatccgaagcctgtataaacgcccttttaggaaatgagctggagcctctc
ccggaagatattgtgcaccaaatccccaatatgaatgcaatagcttctttaaaaaagacc
actgaaattcaaagcaagtactggaagtcagtggagccatattctgtgccagtggattgt
gctctggctgagtctcagaaacaagagagggaggagacagaaacggtgtctgctatggcc
tctctttcagtggatgttgagcagtgtatccttcaggaaggcagcagagctgctgtcgag
cccatggaagaagagccagccttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (18)   
   RefSeq(pep) (18)   
DNA sequence (18)   
   RefSeq(nuc) (18)   
Protein domain (2)   
   Pfam (2)   
All databases (46)   

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