[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Betta splendens (Siamese fighting fish): 114866758
Entry
114866758         CDS       T08231                                 
Symbol
rxraa
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
bspl  Betta splendens (Siamese fighting fish)
Pathway
bspl03320  PPAR signaling pathway
bspl04148  Efferocytosis
bspl04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:bspl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    114866758 (rxraa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bspl03000]
    114866758 (rxraa)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:bspl03310]
    114866758 (rxraa)
Transcription factors [BR:bspl03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    114866758 (rxraa)
Nuclear receptors [BR:bspl03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   114866758 (rxraa)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 114866758
NCBI-ProteinID: XP_029024725
UniProt: A0A6P7P3U6
Position
12:complement(1283973..1354633)
AA seq 501 aa
METKPFLSLGFLKPQCSLAPPMQRGRSGEACSCFSGVCPLHQRRLSSDSSGQVTSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISSLSSPMNGLASPFSVISSPMGPHSMNSPGMGY
GPSVSPQLNSPMNSVSSTEDIKPPLGLNGVKKFPAQPSGTALSLTKHICAICGDRSSGKH
YGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREVLL
HAAVQEERQRAKDKNENEVESSSCANEDMPVEKILEAEQAVEPKTETYIESNLGAPSNSP
NDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVK
DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSK
GLSNPGEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQMT
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggaaaccaagccgttcctgtcgctggggttcctgaagccccagtgctcgttggcgccc
cccatgcagcgaggccgctccggcgaggcgtgttcctgtttcagtggcgtgtgccccctc
caccagcgccgtctgtcctcagactcctcaggccaggtgacgtcctcccccctgggctca
cccacgtctcaccgggggatgcacccgtccctgctcagccccacgtccatgggcccgtcc
ggctcgctccactcccccatcagcagcctcagttcccccatgaacggcctggcgtcgccc
ttctctgtgatcagctccccgatgggaccccactccatgaactcgcctgggatgggctac
gggcccagcgtcagcccccagctgaactctccaatgaactcggtcagcagcacggaggac
atcaagcccccgctgggcctcaacggcgtgaagaagttcccggcccagccctcaggcacg
gcgctgtcgctcaccaaacacatctgtgccatctgtggagaccgctcctcaggtaaacac
tatggggtctacagctgcgaaggctgcaaaggcttcttcaagaggacggtgcgcaaagac
ctgacgtacacctgccgcgacaacaaggactgcgtcatcgacaagcgccagcgcaaccgc
tgtcagtactgccgctatcagaagtgtttggccatgggcatgaagagagaagtgttgtta
catgcagccgttcaggaggagcgccagcgagccaaggacaagaacgagaacgaggtggag
tccagcagctgcgccaacgaggacatgccggtggagaagatcctggaggcggagcaggcg
gtggagcccaagacggagacctacatcgagagcaacctgggcgctccgtccaactcgccc
aacgacccggtgacaaacatctgccaggcggctgataaacagctgttcacgctggtggag
tgggccaagaggatcccccacttctctgagctgccgctggacgaccaggtcatcctccta
cgagcaggttggaacgagctgctcattgcgtccttttcgcaccgctccatagccgtgaag
gacgggatcctgttggcgacggggctccacgtgcaccgcaacagcgcccacagcgccgga
gtgggcgccatctttgacagggtgctcacagagctggtgtctaagatgagggacatgcag
atggataagacagaactgggctgcctccgagccatagttctgttcaacccagactccaag
ggcctctccaacccaggcgaggtggaggctctgagggagaaggtctacgcgtccctggag
gcctactgcaaacacaagtaccccgagcagccgggcagattcgccaagctgttgctgcgg
ttaccggcgctgcgctccatcggcctcaagtgtctggagcacctgttcttcttcaagctt
atcggcgacacgcccatcgacacctttctcatggagatgctggaagccccgcatcagatg
acatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system