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KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172337
Entry
110172337         CDS       T05002                                 
Name
(RefSeq) retinoic acid receptor RXR-alpha-A
  KO
K08524  retinoid X receptor alpha
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03320  PPAR signaling pathway
bpec04148  Efferocytosis
bpec04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    110172337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bpec03000]
    110172337
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:bpec03310]
    110172337
Transcription factors [BR:bpec03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    110172337
Nuclear receptors [BR:bpec03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   110172337
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 DUF6649 tRNA_bind_3
Other DBs
NCBI-GeneID: 110172337
NCBI-ProteinID: XP_020793850
Position
Unknown
AA seq 501 aa
METKPFLSLGFLKPQCSLAPPMQRGRSSDGCSCFSGVCPLHQRRLSSGKTSYYSSGQVTS
SPLGSPTSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGLASPFSVISSPMGPHSMTS
PGMGYGPSVSPQLNSPMNSVSSSEDIKPPLGLNGVMKVPAQPSSTALSLTKHICAICGDR
SSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMK
REAVQEERQRAKEKAESEVESSGCANEDMPVEKILEAEQAVEPKTETYIETNLGMTSNSP
NDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVK
DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSK
GLSNPSEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQMT
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggaaactaaaccgtttttatctttggggttcctgaagccccagtgctcgttggctcct
cccatgcagcgtggccgttccagtgatggctgctcctgcttcagtggagtctgccctctt
caccagcgacgcttgtcctccggtaagacaagctactattcttcaggccaggtcacctct
tctcccctgggctcccccacgtctcacagagggatgcacccgtccctgctcagcccgacc
tccatggggccctcgggatccttgcactctcccatcagcaccctgagctcgcccatgaac
ggcctggcatcgcccttctctgtcatcagctcacccatgggaccccactccatgacctcc
cccggcatgggctacggccccagtgtcagcccccagttgaattcgcccatgaactcggtg
agcagctccgaggacattaagccgcctctgggtctcaacggagtgatgaaggtcccggcc
cagccctccagcaccgccctgtccctcaccaaacacatctgtgccatctgcggagaccgg
tcatcaggtaaacactacggcgtgtacagctgcgagggctgcaaaggcttcttcaaacgc
acggtgaggaaagatctgacctacacgtgcagagacaacaaagactgcgtgatcgacaag
cgccagaggaaccgctgccagtactgccgttatcagaagtgtctggctatgggcatgaag
agagaagctgtccaggaggagcgccagagagccaaagagaaggcggagagcgaggtggag
tccagcggctgcgccaacgaggacatgcccgtggagaagatcctggaggcggagcaggcc
gtcgaacccaagaccgagacctacatcgagaccaacctgggcatgacatccaactcgccc
aatgacccggtgacaaacatctgccaggccgcagacaagcagctcttcactctggtggag
tgggccaagaggatccctcacttctctgagctgcctctggacgaccaggtcatcctccta
cgagcaggttggaatgagctgctgatagcttcgttttcgcaccggtcgatagcggtgaaa
gacgggattctcctggcgaccggactgcacgtgcaccggaacagcgcccacagtgccggc
gtgggagccatctttgacagggtgcttaccgagctggtgtccaagatgagggacatgcag
atggacaagacagaactgggctgcctgcgagctatagtgctcttcaacccagattccaaa
gggctgtccaatcccagtgaggtggaggcgctccgagagaaagtctacgcgtctttagag
gcctactgcaaacagaagtaccccgagcagccgggcaggttcgccaagctgttgctgcgg
ttaccggccctgcgttccatcggcctcaagtgtctggaacacctcttcttcttcaagctc
atcggggacacgcccatcgacaccttcctgatggagatgctcgaggcccctcaccagatg
acataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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