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KEGG   Brassica napus (rape): 111200441
Entry
111200441         CDS       T04128                                 
Name
(RefSeq) syntaxin-42-like isoform X1
  KO
K08489  syntaxin 16
Organism
bna  Brassica napus (rape)
Pathway
bna04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    111200441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    111200441
Membrane trafficking [BR:bna04131]
 SNARE
  Syntaxin (Qa)
   Stx-TGN / EE
    111200441
SSDB
Motif
Pfam: SNARE Syntaxin Prominin FlxA COG5_N
Other DBs
NCBI-GeneID: 111200441
NCBI-ProteinID: XP_048595074
Position
A9:282346..284597
AA seq 323 aa
MATRNRTTVYRKHRDACKSARAPLSDSFGGPVIEMVSGSFARSNHSSYAPLSTNDPGPSS
SNDDAFTIGLPPAWVDDSEEITFNIQKVRDKMGELAKAHSKALMPTFGDNKGDQRVVEMI
THEITDLLRKSEKRLHNLSSRGGGPSEESNLRKNVQRSLATDLQSLSMELRRKQSTYLKR
LQQQKEGQDGVDLEFNMNGKMSRMDEDEELGGMGFDEHQTVTLKEGQHVSAEREREIQQV
LGSVNDLAQIMKDLSALVIDQGTIVDRIDYNIQNVSTSVGEGYKQLQKAERTQREGAMVK
CAMILLILCFIMIVLLILKNVLF
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcgacgaggaaccgaacgacggtgtacagaaaacatagagatgcgtgtaagagcgcg
cgagctcctttatccgattcgttcggtggtccggtgatcgaaatggttagcggctctttt
gctcggtccaaccactcctcttatgctcctttgagcaccaatgatcctggtccctcaagt
agcaatgatgatgcgttcacaattggtctgccaccagcttgggtggacgactctgaggag
atcacttttaatatacagaaggtgagagacaagatgggtgagctagcaaaggctcattca
aaggctctaatgcctacgtttggagataacaaaggggatcagcgtgtagtggagatgatc
actcatgaaatcacggatctgttgaggaagtcagagaagaggttacacaatttatctagt
agaggaggagggccttcagaagaatctaatctcaggaaaaatgtgcagcgttctcttgca
acagatcttcagagcctctccatggagctccgcagaaaacagtctacttatttgaaacgt
ctccagcagcagaaagagggtcaggatggagtagatttggagtttaacatgaatggaaag
atgtcaagaatggatgaagacgaagaacttggtggcatgggttttgatgaacaccagaca
gtcacgttgaaggaagggcaacatgtctcagcggaaagggaaagagaaatacagcaggtg
ttggggtcagtgaatgatcttgcacagataatgaaagacttatcagctcttgtgattgat
cagggcacaatagttgatcggatagactacaatatccaaaatgtttctacatctgtcggg
gaaggctataagcaactacagaaggcggagagaacacaaagagaaggagcaatggtgaaa
tgtgcgatgatactccttatactttgcttcataatgattgtccttttaattctcaagaat
gtattgttttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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