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KEGG   Bos indicus (zebu cattle): 109566619
Entry
109566619         CDS       T04792                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03320  PPAR signaling pathway
biu04148  Efferocytosis
biu04151  PI3K-Akt signaling pathway
biu04659  Th17 cell differentiation
biu04919  Thyroid hormone signaling pathway
biu04920  Adipocytokine signaling pathway
biu04928  Parathyroid hormone synthesis, secretion and action
biu04932  Non-alcoholic fatty liver disease
biu04976  Bile secretion
biu05160  Hepatitis C
biu05200  Pathways in cancer
biu05202  Transcriptional misregulation in cancer
biu05207  Chemical carcinogenesis - receptor activation
biu05216  Thyroid cancer
biu05222  Small cell lung cancer
biu05223  Non-small cell lung cancer
biu05226  Gastric cancer
biu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:biu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    109566619 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    109566619 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    109566619 (RXRA)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    109566619 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    109566619 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    109566619 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    109566619 (RXRA)
   05202 Transcriptional misregulation in cancer
    109566619 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    109566619 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    109566619 (RXRA)
   05216 Thyroid cancer
    109566619 (RXRA)
   05222 Small cell lung cancer
    109566619 (RXRA)
   05223 Non-small cell lung cancer
    109566619 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    109566619 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    109566619 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    109566619 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:biu03000]
    109566619 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:biu03310]
    109566619 (RXRA)
Transcription factors [BR:biu03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    109566619 (RXRA)
Nuclear receptors [BR:biu03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   109566619 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 109566619
NCBI-ProteinID: XP_019826711
UniProt: A0A6P5CKR9
Position
11:complement(109190377..109215519)
AA seq 439 aa
MAAPSLHPSLGPSIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTP
TLGFGTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRGESEVESSSSANEDMPVEKILEAELAVEPKTETYVEANVGLNPSSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggccgccccctcgctgcacccctccctggggcccagcatcggctcctcgctcggctct
ccgggacagctgcactcacccatcagcaccctcagctcgcccatcaacggcatgggccca
cccttctcggtcatcagttcccccatgggcccgcactctatgtcggtgcccaccacaccc
accctgggctttggcaccggcagcccccagctcagctcgcccatgaaccccgtgagcagc
agcgaggacatcaagcccccactgggcctcaatggtgtcctcaaagtgccggcccacccc
tcagggaacatggcgtccttcaccaagcacatctgtgccatctgcggggaccgctcctca
ggcaagcactacggggtgtacagctgcgagggctgcaagggcttcttcaagcggacggtg
cgcaaggacctgacctacacctgccgggacaacaaggactgcctgattgacaagcggcag
cgcaaccgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagcgcgaa
gccgtgcaggaggagcggcagcggggcaaggaccggggcgagagcgaggtggagtccagc
agcagcgccaacgaggacatgccagtggagaagatcctggaggccgagctggccgtcgag
cccaagaccgagacctacgtggaggcgaacgtggggctgaaccccagctcgcccaacgac
cccgtcaccaacatctgccaagcggctgacaagcagctcttcacactggtggagtgggcc
aagcggatcccgcacttctccgagctgcccctggacgaccaggtcatcctgctgcgagca
ggctggaacgagctgctcatcgcctccttctcgcaccgctccatcgccgtgaaggacggc
atcctcctggccaccgggctgcacgtacatcgcaacagcgcccacagcgcaggcgtgggc
gccattttcgacagggtgctgacggagctggtgtccaagatgcgggacatgcagatggac
aagacggagctgggctgcctgcgcgccatcgtcctcttcaaccccgactccaaggggctc
tcaaacccagccgaggtggaggcgcttcgcgagaaggtctatgcgtccctggaggcgtac
tgcaaacacaagtaccccgagcagccaggaaggttcgccaagctgctgctgcgcctgccc
gctctgcgctccattggcctcaagtgcctggagcacctcttcttcttcaagctcatcggg
gacacgcccatcgacaccttcctcatggagatgctggaggccccgcaccagatgacttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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