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KEGG   Bufo bufo (common toad): 121001130
Entry
121001130         CDS       T07950                                 
Name
(RefSeq) collagen alpha-6(VI) chain-like isoform X1
  KO
K06238  collagen type VI alpha
Organism
bbuf  Bufo bufo (common toad)
Pathway
bbuf04510  Focal adhesion
bbuf04512  ECM-receptor interaction
bbuf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:bbuf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121001130
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121001130
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bbuf04147]
    121001130
   00536 Glycosaminoglycan binding proteins [BR:bbuf00536]
    121001130
Exosome [BR:bbuf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121001130
Glycosaminoglycan binding proteins [BR:bbuf00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121001130
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   121001130
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 vWA_SIBA-E vWA-TerF-like DUF1194 Rep3_N
Other DBs
NCBI-GeneID: 121001130
NCBI-ProteinID: XP_040287993
Position
5:201635972..201989790
AA seq 2028 aa
MKSMFGLLVAVIWVQLSSTQITETKPSITSTYQKKINGSAVCDHGIATDLVLMVDISQHT
IRQNKDLKDFLINVLSDLKISDHCVHVGLVAFSDEAEVILPLSTGVNMSIVEKHILDLQP
SNEKIARIGRAINYTRGEVFGDSLASRKNQGIKQTTILVSHKSSTDSVTEAAYLLRREKN
RIFTVAVSEANDTQINQIASHPTRNYKIKVKTFSDLSKSTDILLKKIENAVERDTRSSPK
LTHETKLGCQKTDRTDIYLLIDGSGSIYPDEFTAMKSFLVDLIDMFEIGPQKVRLGAVQY
SDRSQLEIGIGKKYSKIQLKLETRNIRQLGGGTNTGAAINFTCELILDTANIREGNVPVY
FIVLTDGDSQDSVKEAAMILRENKVNMFAIGVKEANQTQLLEITGDPKRVHFVNNFDSLN
DIKILLAQQICSSKVCHKVQADVMFLVDSSGSISTDNFNKIKNFMKSLVNKTDIGPDNVQ
FGIVQFSNDNMEVLQLSKDRTKAIIWDAIDKMGHMAQGSYTGKALEFVSQYFTEIKGSRP
KVKKLLILITDKKAQDDVKLQSAALRNSGVSIISMGIFNANKAQLEEISGPTGQVHYAES
FETLKFEEQKLLADICKEDCPRIQQADIVFVIDTSSSITPDQAKIIQSFVISFVNKSDVA
PDKVQFGALKYADDPYKMFYLNRYRNKNDVITAIEGDKQSGINTYTAKALEFSKTFFTEK
QGSRQRRGVPQYLLIITDGESHDKHNLNEASKQLHDAGIIVNAIGVGEAQTEELKTMAGS
MGKWFFIKEFEGLKDIFVNISEVVCEKSACNKELDISFLIDGSGGIKQADFEKIQDFMVS
VVDDFDISLGKVHVGVAQYNDSFRTEFQLKTYLDKETLKLMIKNIPRMKTGNALTGNALK
HMDYALLSPASNSRINEKIQQILIVITDDNSQDEVAKPAEALRNKGIITYALGVGKVSKT
QLLQIAGRSERQFSVHNYDAIKSIKKRMVEDICVQRPAENCSLDFIVGFDISTSPSGASL
FHGQNLLGVRIANILNSMMNVRSVSCAPGAVPQISVAFYVPNAATPITPHFHTYSSDLAQ
ILQTISVQGPSYLTTSVLQSMWKTFQKGDAGKAKMILIFTDGLDENVEDIEQTAEDLRKL
GLNGLVTVALEGTKGYDDIKYIEFGRGFEYNNQLHIGMSDIEFRLARQMSHVNEKTCCCV
FCECIGLRGAPGTYGGRGRKGSTGLKGHQGYRGEQGMDGERGLPGSMGEHGDIGCPGTKG
PKGNRGLPGDKNEHGEHGLDGFNGEEGLSGPPGKKGEKGEIGDQGKSGIRGSKGYKGLEG
QKGAIGDPGERSTIFGPTGPKGELGMEGDPGLDGIPGQPGTVGSESLPGRRGVPGPPGIK
GDLGVPGAAGEQGFRGPQGQLGIQGIKGHEGKNGLDGLLGPIGSPGGVGDRGNSGIKGKK
GEPGDPGVKGNPGEVGNRGFMGEIGTNGVGARGRKGIKGSQGTQGFIGFKGQPGEPGVVG
ERGKNGEKGQSSFPDKGAVGDPGIPGGPGRRGQKGIQGQTEQSPCELIDFIRNTCPCCQG
KKPCPVYPTELVFALDMSSDVRLPVFKRMINMVTYLLTNVTIRGGNCPVGARVAVMSYNK
LTNYLVRFSDFQNKEKLLNAVNNISLEISSNSRDIGTCMRFVARNVFKRSLQGATVRRIA
VFFSNGRTDDPAALSTAAMEYNGLEIIPAVISFTPAPAIKRAFEIDDSGTFQLIEISAND
FKPQIQTFLTCTLCYDTCKPDVLCGESNSAPKIVPIDVGFLLDSSYNMNLDEYEAARSFI
SRLIDGLDIPNTGARVALVSSATPGSSPGNEQKPYLEFDFSTYSNAKIMKRHLQENNHHL
QNPPAFGNTFKWMLENIMSKTPDLKKNKAIIMILSGETSDWDKQTLREVSLEAKCKGFAL
FVLFIGRTYNNTELMELPSAPTEHHLLQLGEGHKPNFEYAARFTQAFLNSVKLSINKYPP
PELKSKCSSLNNSRKKRLVMKQLAPTNKSSGRPKNTSDSISGKLPAYI
NT seq 6087 nt   +upstreamnt  +downstreamnt
atgaaatctatgtttggtttacttgtggcggttatctgggtgcagctatcatctactcaa
attacagaaaccaaaccatctattacttctacataccaaaagaaaattaatggatcagca
gtgtgtgaccatggtatagcaacagatctggtgctaatggtggatatttctcaacataca
attcggcaaaacaaagacttgaaagatttcttaattaatgtcttatccgatctgaagata
agtgatcactgcgttcatgtgggcctggtggcattcagtgatgaagcagaagtcattctc
cccctcagtaccggagtcaacatgtctattgtggaaaagcatattttagaccttcaaccg
tcaaatgaaaagattgcaagaattggaagagcaataaattatactagaggtgaagtgttt
ggtgatagtctggcaagcagaaagaaccagggaataaaacagacaacaatcctggtcagt
cataagtcctctacagatagtgtaactgaggcagcctatttacttagacgagaaaaaaat
agaatttttaccgttgccgtttctgaagcaaatgatacccaaatcaaccaaattgcatcg
catccgactcgaaattataaaatcaaggtgaagacattttctgatctttcaaaaagcaca
gacattttattgaagaagattgagaatgctgttgaaagagatactcgttcttcgcctaaa
ctaacccatgagacaaaattaggatgtcagaaaacagaccgaactgatatttatctgctc
attgatggttctggaagtatttatcccgatgaatttacagccatgaagtcatttctggtg
gatctcatagatatgtttgaaattgggcctcagaaggttcgccttggggctgtacagtac
tctgaccgcagtcaactggagattggtattggaaaaaagtactctaaaatccagttgaaa
cttgagacaaggaacattaggcagctaggtggaggaaccaacacaggagcagcaataaat
ttcacttgtgaattaatattagatactgctaatatcagggaagggaatgtgcctgtgtat
tttatcgtacttacagatggagattctcaagatagtgtgaaggaggctgccatgatcctc
agagaaaacaaagtgaatatgtttgcaattggggttaaagaagccaaccaaactcagttg
ctggaaatcactggagatcccaaaagggtccattttgtaaataattttgattctctgaac
gacataaaaattttgctagcccagcaaatctgttctagtaaagtttgccataaagtgcaa
gctgatgtgatgttcctggttgacagttctggaagtataagcacagataattttaataaa
attaagaattttatgaaaagtctggttaacaagacagacattgggccggataacgtacag
ttcggtattgttcaattcagtaatgataacatggaggtgctacagctaagtaaggataga
accaaagctattatctgggatgctattgacaaaatgggacatatggcccagggttcatac
accgggaaagccttggaatttgtgtctcaatacttcacagaaatcaaaggctcaagaccc
aaggtgaaaaaactcctgatacttataacagataaaaaagcacaagatgatgtcaaacta
cagtcagcagctctgaggaatagtggagtaagcattatctctatgggcattttcaatgca
aataaagctcaactagaagaaataagtgggcctacaggacaagtacattatgcagagtct
tttgaaacattaaagtttgaagaacaaaaattgcttgctgacatctgtaaagaagattgt
ccacgaatacaacaggcagacattgtgtttgtgattgatacatcaagtagtatcacccct
gatcaagctaagataatacaatcctttgttatatcttttgtgaataaatcagatgttgca
ccagataaagttcaatttggagctcttaaatacgcagatgatccctataagatgttttac
ctaaatagatacaggaataaaaatgatgttattacagctattgaaggagataaacaatca
ggaataaacacatatactgctaaggccttggaattttcaaaaacattctttacagaaaaa
caaggcagccgtcaacgtagaggagtccctcagtatcttcttattataactgatggtgaa
tctcatgacaaacataacctcaatgaagcatcaaaacagctacatgatgctgggatcatt
gtaaatgccattggagtaggtgaagcccaaactgaagagctaaagacaatggcaggaagc
atgggcaaatggttctttattaaggagtttgagggattaaaggacatttttgtgaacata
tctgaagtcgtatgtgaaaaatcagcatgcaataaagaattagacataagttttctgatt
gatggttctggaggtatcaaacaagcagattttgaaaaaattcaagatttcatggtatct
gtcgttgacgattttgacattagtcttggcaaggttcatgtaggtgttgctcaatataat
gactcattcagaacagagtttcagctcaaaacatatctggacaaagaaactttaaagctc
atgattaaaaacatcccaagaatgaagactggaaatgccctcactggaaatgccctcaag
cacatggattatgccctattaagtccagcaagtaatagtcgtataaatgaaaagatccag
cagatattgatcgtcataacagatgacaactctcaagatgaagttgcaaagcctgcagaa
gctcttagaaataaaggcatcattacctatgctttgggagtgggaaaggtgtctaagact
cagcttctacagattgctggaagatcagagcgacaattttctgttcacaattatgatgca
ataaaaagcattaaaaagagaatggttgaagatatatgcgtccagcggcctgcggagaat
tgttctctcgattttatagttggttttgatatttcaacttctcccagtggtgccagttta
ttccatggtcaaaatctattgggagttcgtattgctaatatcttgaacagcatgatgaac
gtgagaagtgtaagctgtgcccctggagctgtacctcaaatcagtgtagccttttatgtt
ccaaatgcagcaacgcccattactccacacttccacacctatagttcagatttagctcag
atcctccaaaccatttctgtccaaggtccttcctatctcacaacatctgttcttcagtcc
atgtggaagacatttcaaaagggtgatgcaggaaaagcaaagatgatcctaatctttacg
gatggtctagatgaaaatgttgaagacattgaacaaacagcagaagatcttcgaaaacta
ggattaaatgggctagttactgttgctttggaaggaactaagggatacgatgacatcaaa
tatatagaatttggccgaggctttgaatataacaatcagttgcatattggcatgtcagat
atagaatttagacttgcccgacaaatgtcccatgtcaatgagaagacgtgttgttgcgta
ttttgtgagtgtattggacttaggggagctcctggaacgtatggcggtcgtggaaggaag
ggatcaactggattaaaaggacatcaaggctaccgcggtgaacaaggaatggatggcgaa
agaggattgcctggttcaatgggagagcatggtgacataggatgtcccggaaccaaaggc
cccaagggaaacagaggtcttcctggggacaagaatgagcatggagaacatgggcttgat
ggattcaatggagaggaggggttgtctggacctccagggaaaaagggcgaaaagggcgaa
ataggagatcaaggtaaatctggaataagaggatctaaaggatacaaaggccttgaaggg
cagaagggtgctataggtgatcctggagaaagaagcacaatttttggacccacaggtccc
aaaggagaattaggcatggagggtgatcccggactggacggaatacctggacaacctggc
acagttggaagtgaaagtcttcctggtagaagaggcgttcccggaccaccggggattaaa
ggggatcttggagtgccaggtgctgcaggagaacaaggatttaggggtcctcagggacag
ctaggaatccaaggcattaaaggacacgaaggaaaaaatggactagatggccttctgggt
ccaattggttctccaggcggagtaggagatcgtggaaattcaggaataaaagggaaaaag
ggtgaacccggagatcctggagtaaaaggaaaccctggggaagtgggaaacagaggattt
atgggtgaaattggtacaaatggtgttggagcacgtggaagaaaaggaataaagggatct
caaggaacccaaggatttattggttttaagggacagcctggagaacctggtgtggtagga
gaacgtggaaaaaatggtgaaaaaggacaaagttcctttccagataaaggtgcggtggga
gatccaggaataccaggtggccctggtcgcaggggacaaaaaggaattcaaggccaaact
gaacaatctccatgtgaacttattgactttatccgtaatacatgtccatgttgccaagga
aaaaaaccctgccctgtttatccaacagaattggtgttcgcactggacatgtcaagtgat
gtgaggctgccagtgttcaagcgaatgatcaatatggtcacatatcttctgaccaatgta
accattaggggaggtaactgtcctgttggggcaagagtggctgttatgtcctacaacaaa
cttactaattatctggtgaggttttctgacttccaaaataaagaaaaattgctgaatgca
gtgaataatatttctctggaaatttcgagcaatagtcgcgacattggaacttgcatgaga
tttgtagccaggaatgtcttcaagagatctctacaaggagccactgtaagaagaatcgca
gtattcttcagcaatggtcgtactgatgaccctgctgcactcagcacagccgccatggaa
tacaacggtcttgagatcatacctgcagttatatcattcactccagcacctgcaatcaaa
cgagcctttgaaatcgatgactctgggacatttcagttgattgagatttctgcaaatgat
tttaaaccacaaatacaaaccttccttacatgcaccctttgttatgacacatgtaaaccg
gatgtattgtgtggagaaagtaattctgcaccgaaaattgtacctatagatgtaggtttt
ctcctggacagttcttacaatatgaaccttgatgaatatgaagcagcaagaagtttcatc
agtagattgattgatgggcttgatattccaaacactggtgctcgagtggctttggttagt
agtgcgacccctggctctagccctggcaatgaacagaaaccttatcttgagtttgatttt
tcaacatatagtaatgcaaagattatgaagagacacctccaggaaaacaatcatcaccta
caaaatccacctgcctttggaaatacattcaaatggatgcttgaaaacatcatgtctaaa
acaccagacctaaagaaaaataaggccattatcatgatattgtctggagagacaagcgac
tgggataaacaaaccttgagggaagtttctttggaagccaagtgtaaaggttttgctctg
tttgtacttttcattggcagaacatataataatactgaactgatggaacttccaagtgct
cccacagaacatcacctgctccaacttggtgaaggccacaaaccaaattttgaatatgct
gccagatttacccaggcatttctgaattccgttaaattatccataaacaaatatccaccg
ccagagctgaaatctaaatgttccagtttaaataatagcagaaaaaagagattggtcatg
aaacagttagcccccaccaacaagtctagtgggaggcccaaaaatacaagtgacagcatt
tctggaaagctacctgcttacatctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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