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KEGG   Balaenoptera acutorostrata scammoni (minke whale): 103005517
Entry
103005517         CDS       T03086                                 
Symbol
RXRA
Name
(RefSeq) retinoid X receptor alpha
  KO
K08524  retinoid X receptor alpha
Organism
bacu  Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03320  PPAR signaling pathway
bacu04148  Efferocytosis
bacu04151  PI3K-Akt signaling pathway
bacu04659  Th17 cell differentiation
bacu04919  Thyroid hormone signaling pathway
bacu04920  Adipocytokine signaling pathway
bacu04928  Parathyroid hormone synthesis, secretion and action
bacu04932  Non-alcoholic fatty liver disease
bacu04976  Bile secretion
bacu05160  Hepatitis C
bacu05200  Pathways in cancer
bacu05202  Transcriptional misregulation in cancer
bacu05207  Chemical carcinogenesis - receptor activation
bacu05216  Thyroid cancer
bacu05222  Small cell lung cancer
bacu05223  Non-small cell lung cancer
bacu05226  Gastric cancer
bacu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:bacu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    103005517 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    103005517 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    103005517 (RXRA)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    103005517 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    103005517 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    103005517 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    103005517 (RXRA)
   05202 Transcriptional misregulation in cancer
    103005517 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    103005517 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    103005517 (RXRA)
   05216 Thyroid cancer
    103005517 (RXRA)
   05222 Small cell lung cancer
    103005517 (RXRA)
   05223 Non-small cell lung cancer
    103005517 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    103005517 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    103005517 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    103005517 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bacu03000]
    103005517 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:bacu03310]
    103005517 (RXRA)
Transcription factors [BR:bacu03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    103005517 (RXRA)
Nuclear receptors [BR:bacu03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   103005517 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 103005517
NCBI-ProteinID: XP_007194490
UniProt: A0A384B4D1
Position
Un
AA seq 439 aa
MAAPSLHPSLGPGIGSSLSSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTP
TLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRAENEVESTSSANEDMPVEKILEAELAVEPKTETYVEANVGPNPSSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKAELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggccgccccctcgctgcacccctccctggggcccggcatcggctcctcgctcagctcc
ccgggacagctgcactcgcccatcagcaccctgagctcccccatcaacggcatgggcccg
cccttctcggtcatcagctcccccatgggcccccactccatgtccgtgcccaccacaccc
accttgggcttcggcaccggcagcccccagctcaactcgcccatgaaccccgtcagcagc
agcgaggacatcaagcccccgctgggcctcaacggtgtcctcaaagtcccggcccacccc
tcagggaacatggcgtccttcaccaagcacatctgtgctatctgcggggaccgctcctca
ggcaagcactacggggtgtacagctgcgagggctgcaagggcttcttcaagcggacggtg
cgcaaggacctgacctacacctgccgggacaacaaggactgcctgattgacaagcggcag
cggaaccggtgccagtactgccgctaccagaagtgcctggccatgggcatgaagcgcgaa
gctgtgcaggaggagcggcagcggggcaaagaccgggctgagaacgaggtggagtccacg
agcagcgccaacgaggacatgccagtggagaagatcctggaggccgagctggccgtcgaa
cccaagaccgagacgtacgtggaggcaaatgtggggccgaaccccagctcgcccaatgac
cctgtcaccaacatctgccaagcggccgacaagcagctcttcaccctggtggagtgggcc
aagcggatcccgcacttctctgagctgcccctggacgaccaggtcatcctgctgcgggca
ggctggaacgagctgctcatcgcctccttctcccaccgctccatagccgtgaaggacggc
atcctcctggccaccgggctgcacgtccaccgcaatagcgcccacagcgcgggggtgggc
gccatctttgacagggtgctgacggagctggtgtccaagatgcgggacatgcagatggac
aaggcggagctgggctgcctgcgcgccatcgtcctcttcaaccccgactccaaggggctc
tcaaacccggccgaggtggaagcgcttcgcgagaaggtctacgcgtccctggaggcgtac
tgcaaacacaagtaccccgagcagccaggaaggtttgccaagctgctgcttcgtctgccg
gccctgcgctccatcggcctcaagtgcctggaacacctcttcttcttcaaactcatcggg
gacacgcccatcgacaccttcctcatggagatgctggaagccccgcaccaaatgacttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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