[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Bos taurus (cow): 530102
Entry
530102            CDS       T01008                                 
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
  KO
K06238  collagen type VI alpha
Organism
bta  Bos taurus (cow)
Pathway
bta04151  PI3K-Akt signaling pathway
bta04510  Focal adhesion
bta04512  ECM-receptor interaction
bta04820  Cytoskeleton in muscle cells
bta04974  Protein digestion and absorption
bta05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    530102 (COL6A6)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    530102 (COL6A6)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    530102 (COL6A6)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    530102 (COL6A6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    530102 (COL6A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bta04147]
    530102 (COL6A6)
   00536 Glycosaminoglycan binding proteins [BR:bta00536]
    530102 (COL6A6)
Exosome [BR:bta04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   530102 (COL6A6)
Glycosaminoglycan binding proteins [BR:bta00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   530102 (COL6A6)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   530102 (COL6A6)
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 vWA_SIBA-E Radical_SAM Integrin_beta
Other DBs
NCBI-GeneID: 530102
NCBI-ProteinID: XP_015329636
BGD-bta: BT16918
VGNC: 56214
UniProt: F1MD40
Position
1:complement(151564068..151680059)
AA seq 2270 aa
MKMLLILFLIIICSHVSVNQHSGPEYADVVFLVDSSDHLGIKSFPFVKAFINKMISSLPI
EADKYHVGLAQYSDGLHREFLLSTFKSRGPMLNHLKKNFGFLGGSLQVGKALREVHRAYF
SSGRDRKQFPPILVVLASGESEDAVEEAAEALRKDGVRIVSVGMQGVSEKTLKAMATGQF
HYNLRTVRDLSSFSQNMTQILKDAAQYKDRAVNDILVEVCQGPSVADVVFLLDMSTNSSW
EDFDYLKEFLEESISALDIKEHCMRVGLVAYSNETKVISTLSRGVNKSEVLQDIQSLAPQ
AGKAYTGAALRKIRKEVFSAQHGSRKNQGVPQIAVLVTHSPSQDNVTKAAVNLRRQGVIV
FTIGVEGASDTQLEKIASHPAEQYVSQLRSFSDLAAHNQTFLKKLRNQITHTVSVISERT
ETLKAGCVDTEEADIYLLIDGSGSTQATDFQEMKTFLSEVAGMFNIAPQKVRVGAVQYAD
RWDLEFEISKYTNKHDVRKAIENIRQMGGNRNTGAALNFTLGLLQRAKQQRGGRVPCHLV
VLTNGASRDSVSGPANRLSEELIHVYAIGVREANQTQLREIAGEEKRVYYVHDFDALKDI
RNQVVQEICAEEACKEMKADIMFLVDSSGSIGLENFIKMKTFMKNLVSKSQIRADRVQIG
VVQFSDVNKEEFQLNRYTSQEEISDAIDRMAHIGETTLMGSALTFVSQYFSPAKGARPNV
RKFLILITDGEAQDIVKDPAVALREEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVENFD
ILKHIEDDLVFGICSPHEECKRIEVLDVVFVIDSSGSIDHDEYNIMKDFMINLVKKADVG
KNHVRFGALKYADDPEVLFYLDNLDTKWEVISVLQNDQPLGGNTYTAEALGFSDHMFTEA
RGSRLHKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIAGANPVELLAMAGS
SDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFRKMKEF
LASVIQDFDISNNRVRIGAAQFSHTYQPEFPLGMFIGKEEISFQIENIKQIFGYTHIGAA
LRQVGHYFRPDMGSRIHAGTPQVLLVLTDGQSQDEVAQAAEELRHKGIDIYSVGIGDVDD
QQLVQITGTANKKLTVHNFDELKKVKKRIVRNICSPRGDSNCFVDVVVGFDISTQQNGQT
LLEGQSWMETYLQDILRVISSLNGVSCEVGTETQVSVAFQVTNAAEKYSPKFEIYSENIL
NSLKDLTVKGPSLLNANHLSSLWDAFQNKSAARGKVALLFSDGLDDDVEKLERKSDELRK
EGLNALITVALDGPTSSSDLADLLYIEFGKGFEYRTQLTLGTRDLGSQLSKHLVNVAERT
CCCLFCKCIGGDGTRGDPGPAGKTGLPGFKGSEGYLGEEGTAGERGASGPVGEQGTKGCY
GAKGPKGNRGLNGQEGEAGESGIDGLNGEQGDSGLPGAKGEKGIEGAQGIPGERGISGDH
GAKGLRGDPGVPGFDNSIEGPKGLKGELGRQGRRGQPGPPGTPGSRRTTAAHGQRGHTGP
QGKPGIPGPDGLAGSLGLKGPQGPRGEAGVKGEKGNLGSKGPQGLPGPAGEAGSQGRLGS
QGNKGEPGDLGIKGAIGLRGPRGLPGDDGNPAYGSVGSRGAKGQEGFPGEIGPKGEVGDP
GGPGQTGPKGARGKTVSAGLPGEPGSPGELGPPGRKGVKGAKGLASFSTCELIQYVRDHS
PGRQGAPQCPVYPMELVFALDQSRSVTEPEFARMKAMLSSLLSGLRVREDHCPTGARVAV
LAYDSHARLLIRFSDTYRKDRLLREIEALPYERSTASRDIGKAMRFVSRHVFKRMLPGSH
ARRIATFFSGGPSVDPQTVTTAGLEFSALDIIPVVIAFNQVPAVRRSFAIDDTGRFQVII
IPSGADSAPALEGLQRCTFCYDVCKPDASCDQARPPPVPSYVDAAFLLDGSRHVGSAEFE
DIRGFLGALLDHFEITPEPESSVTGDRVALLSLSPPHFLPNTQRSPVRSEFNLTTYKSKR
LMKRHVEESVQQPNGDAFIGHALQWTLDNVFSRTPNLRRNKVIFVVSAGETSHLDRETLK
QESLRAKCQGYTLFVFSLGPSWNDQELEDLASYPLDHHLIQLGRIHKPDHRYAVKFVKAF
ISSVRRAINKYPPINIKAKCNRLSSMEPQQHPLQFVRSVVPGPHRATLKEAALQKVKFFQ
HKNYFSKIARGGRDGTVQNFTRNIFHVFENGKRVIKAAPKQHAKRGAPRV
NT seq 6813 nt   +upstreamnt  +downstreamnt
atgaaaatgctgctcattttgttccttataataatttgttcccatgtttctgtcaaccaa
cattctggccctgagtatgctgatgtggtgtttctggtggacagctccgaccacctggga
attaagtccttcccatttgtgaaggccttcatcaacaagatgatcagcagcctccccata
gaggctgacaagtaccacgtgggcctggcccagtacagcgatgggctccacagagagttc
ctgctcagcaccttcaagagcaggggccccatgctgaaccacctcaagaagaacttcggg
ttcctggggggctccctgcaggttgggaaggctctccgggaggtgcacagggcctacttc
tcaagcgggagggacaggaaacagtttcccccgatcctggtggtcctggcctccggcgag
tctgaagatgctgtggaagaggccgccgaagcgctgcgcaaagatggggtgaggatcgtc
tccgtggggatgcagggcgtgtccgagaagaccctgaaggccatggccacgggccagttc
cactacaacctccggactgtcagggacctcagctcgttctcccaaaacatgacgcagatt
ctcaaggatgcagctcagtacaaggacagggcagtcaatgacatccttgtggaagtttgc
caaggcccttccgtggctgacgttgtgttcctgttggatatgtccaccaacagcagctgg
gaggactttgactatcttaaagaattcctggaagaaagcatatctgctctggacatcaag
gagcactgcatgagggttggcctcgtggcctacagcaacgagacgaaggtgattagcacg
ctgagcaggggcgtaaacaagtcggaggttctgcaggacatccagagccttgctccccag
gccgggaaggcctacactggagccgccttgaggaagatcaggaaggaagtcttcagcgcg
cagcacggcagtcggaagaaccagggggtgccacagatcgccgtgctcgtgacccacagc
ccgtcccaggacaatgtgaccaaggccgccgtgaacctccgacgccagggggtgatcgtc
ttcaccatcggtgtagagggggccagcgacacccagctggagaagatcgcgtctcacccc
gctgagcagtacgtgtcccagctgaggtccttctctgacctggctgcccacaaccagacg
tttctgaagaagctgcggaatcagatcacacacacggtctccgtcatttccgaaaggacc
gaaaccctcaaagccggttgtgtggacacggaggaagcagacatctacctgctcatcgat
ggctccgggagcacccaggccacagacttccaggagatgaagaccttcctgtcagaggtc
gcagggatgttcaacatcgctccccagaaggtgcgggttggggctgtccagtacgccgac
cgctgggacttggaatttgagatcagtaaatacacgaacaagcacgacgtcagaaaggcc
atcgagaacatcaggcagatgggcgggaacaggaacacgggcgccgccttgaacttcacc
ctggggctgctgcagagggcaaagcagcagcggggaggcagagtgccctgccacctcgtc
gtgctgaccaacggtgcgtcccgggacagcgtctcggggcccgcaaacagactgagcgag
gagctcatccacgtctatgccatcggggtcagggaggctaaccagactcagctgcgcgaa
atcgccggcgaggagaaacgggtctactacgtgcatgacttcgatgccttgaaagacata
agaaaccaggttgttcaagaaatctgtgctgaagaagcctgcaaagagatgaaggccgac
atcatgttcctggtggacagttctggcagtataggactagagaacttcatcaaaatgaaa
acatttatgaagaacctggtgagcaaatctcagatcagggcagatcgagtgcaaatcggt
gtggtccagttcagcgacgtcaataaggaagagtttcagctcaacagatacacatcccag
gaggaaatttcagatgcaatagaccgaatggctcacattggagaaaccaccttgatgggt
agtgccctgacctttgtgtctcagtacttcagccctgccaagggagcccggcccaatgtc
aggaaattcctcatcctcatcacggacggtgaggctcaggacatagtcaaggacccagcg
gtggcacttcgggaagaaggcatcattatctactctgtaggggtgtttggctccaacgtc
acccagctggaagagatcagcgggaggccagagatggttttttatgttgagaattttgac
attctgaagcacattgaggatgaccttgtgtttggaatatgcagcccccatgaagaatgc
aagcgcattgaagttttagacgtcgtgtttgtaatcgacagctctggcagcattgaccat
gacgaatacaatatcatgaaggactttatgatcaacttggtgaaaaaagctgatgtgggc
aagaatcacgtccggtttggggctctgaagtacgcggatgacccggaggtgctgttttat
ctggataacctggacaccaaatgggaggtgatttcggtgctccagaatgatcagcccttg
gggggcaacacttacaccgccgaggccctgggcttctcagaccacatgttcacggaagcc
cggggcagccgtctgcacaaaggggtcccacaggtcctcatcgtgatcaccgatggggaa
tcccacgatgctgataagctcaatgctacagccaaggccttgcgagacaagggcatcctt
gtcctggccgtgggcatcgccggtgccaaccctgtggagctgctggccatggcaggatcg
agtgacaagtacttcttcgtggaaacttttggaggtctgaaggggatattttcagatgtg
tctgccagcgtatgtaactcttcaaaagtagactgtgaaattgaaaaagttgatctcgtg
ttcctcatggatggttcaaatagcattcatccagatgactttaggaagatgaaggaattc
ttggcctctgtcattcaagactttgatatcagtaacaacagagtgcgtataggagctgcc
caattcagccacacttaccagccagagttccccctgggaatgttcatcggcaaggaggag
atctcatttcagattgaaaacatcaagcagatctttggatacacccacatcggtgccgcc
ctccggcaggtggggcactacttccggccggacatgggcagccggatccacgcaggtacc
ccccaggtgctgctggtcctcacggatggccagtcccaagacgaggtggctcaggctgcc
gaagagctgagacacaaaggcatcgacatttactccgtgggcatcggggatgtagatgac
cagcagctcgttcagatcaccgggaccgccaataagaagctgacagttcacaactttgac
gaactgaagaaggtcaagaagaggattgttcgtaacatctgttccccccggggtgacagc
aattgctttgtggacgttgtggtgggatttgacatctcaactcagcagaatgggcagact
ttgctcgaaggccagtcctggatggaaacctatcttcaagacatcttacgtgtcatcagc
tccctcaatggggtaagctgtgaggtgggcacggagactcaggttagtgtggcttttcaa
gtgaccaatgctgcagaaaaatattcccccaagtttgagatctacagtgaaaacatcctg
aacagcttgaaggatttaacagttaaaggaccgtctcttctcaacgcaaaccacttgagt
tctctgtgggatgcatttcagaataagtcagctgctcggggaaaggtggccctcttattt
tcagatggattggatgatgatgttgaaaaacttgaacgaaaatctgatgaacttagaaaa
gaaggcctgaatgccctcatcactgttgctctggatggacccaccagttccagcgacctg
gctgatcttctgtacattgaatttgggaaaggatttgagtacaggacgcagctcactctt
gggaccagggatcttgggagccaattgtcaaagcacctggtcaatgttgcggaaaggacg
tgctgctgtttattctgcaagtgcattggaggagatggcacaaggggagaccctggacca
gcagggaaaacgggacttccaggttttaaaggcagtgaaggctacctgggagaggaaggc
actgctggagaaagaggagccagtggacctgtgggagaacaaggtactaaaggatgctat
ggtgccaagggccctaagggaaacaggggactaaatggacaggagggagaagctggggaa
agtggaattgatggcttaaatggagaacagggtgatagtggtcttcctggagcaaaagga
gagaaaggcattgaaggagcccagggaatcccgggagagagaggaatttctggggaccat
ggagcaaagggcttgcgtggagacccaggagttcctggatttgacaatagcatagaggga
cccaagggcttgaaaggagaacttggaagacagggaagaagaggccagccagggccccct
ggaactcccggctccagaaggacgacagcagctcatggccagaggggacatacaggccca
caggggaaaccaggcatcccaggtccagacggacttgcagggtcactgggacttaagggc
cctcagggtccaagaggagaagctggtgtgaaaggagaaaaaggaaatctgggaagtaaa
ggtccccaggggcttccaggaccagcaggagaggcagggagtcaaggccgtttgggaagc
caaggaaataaaggagaacctggcgatctggggataaagggagccattggtcttcggggt
cctcgaggcttgccgggtgatgacggcaacccagcttatgggagtgttggaagcagagga
gcaaaggggcaagaaggattccctggagaaatcggacctaagggtgaggtcggggaccct
ggtggcccaggacaaactggacccaagggcgctagaggcaagacggtatctgctgggctt
cccggagaaccaggatcccctggggagctgggacctcctggacgcaagggtgtgaaaggg
gccaaaggattggcttcgttttctacatgtgagctcatccagtatgtgcgggaccatagt
cctggcagacagggagcgcctcagtgccccgtgtacccgatggagctggtgttcgcgctg
gaccagtcccggagcgtcacagagcccgagtttgcgcggatgaaggcgatgctgtcctcc
ctgctgagcggcctccgggtccgggaggaccactgccccacaggtgcgcgcgtggccgtg
ctggcctacgactcccacgccagactcctcatccgcttctccgacacgtacaggaaggac
agactcctccgagagatcgaggccctcccttacgagcgctccacggccagcagggacatc
ggcaaggccatgaggtttgtctccaggcacgtcttcaagcggatgctcccggggtctcac
gccagaagaatcgccaccttcttcagcggcggcccgtctgtggacccccagaccgtcacc
accgctggcctggagttcagcgccctggacatcatcccagtggtgatcgccttcaatcag
gtgcctgccgtccggcgatcgtttgcgattgacgacacaggcagattccaagtcatcatt
atcccatccggagctgactctgcaccagcactcgagggactccagcggtgtactttctgc
tacgatgtatgcaagccggacgcttcttgcgatcaagccagaccaccccctgtgccatct
tacgtggacgctgctttccttctggacggctcccggcatgtgggaagtgcagaatttgaa
gacatacgaggattcttgggggcgctgttagatcacttcgaaatcaccccagagcccgag
tcctctgtcaccggagaccgggtggccctattaagcctcagtccccctcacttcctaccc
aacactcagaggagccctgttagaagcgaattcaacctgaccacctacaagagcaaacgc
ctcatgaagagacacgtggaagaatccgttcagcagccaaatggagatgcttttattggt
cacgccctccagtggactctggacaatgtcttctcaaggacacccaatctgagaaggaat
aaagtcatttttgtggtatctgctggggaaaccagtcacttggacagggaaaccttaaag
caagaatccttgagggccaagtgtcaaggttataccctgtttgtgttttcccttgggcct
tcttggaatgaccaggaactggaagatctagccagctaccctttggatcaccacttgatc
cagcttggccgcattcataagcctgaccacagatacgctgtgaagtttgtgaaggctttt
ataagctcagtcaggcgtgcaatcaacaaatatccaccaataaatatcaaagcaaagtgc
aacagactcagctctatggagccgcagcagcacccactccagtttgtgcgaagcgttgtt
cctgggccacacagagctaccctcaaagaagctgcattgcagaaggtgaagttctttcaa
cacaaaaattacttttcaaaaatagcaagaggcggcagagatggtactgttcaaaatttt
accagaaacatattccacgtcttcgaaaatggaaaaagggtgataaaagcagctcccaaa
caacatgctaaacgaggcgctccgagagtgtaa

  All links  
Gene (29)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system