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KEGG   Apodemus sylvaticus (European woodmouse): 127688616
Entry
127688616         CDS       T10613                                 
Symbol
Col6a5
Name
(RefSeq) collagen alpha-5(VI) chain
  KO
K06238  collagen type VI alpha
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04151  PI3K-Akt signaling pathway
asyl04510  Focal adhesion
asyl04512  ECM-receptor interaction
asyl04820  Cytoskeleton in muscle cells
asyl04974  Protein digestion and absorption
asyl05165  Human papillomavirus infection
Brite
Exosome [BR:asyl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127688616 (Col6a5)
Glycosaminoglycan binding proteins [BR:asyl00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   127688616 (Col6a5)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   127688616 (Col6a5)
SSDB
Other DBs
NCBI-GeneID: 127688616
NCBI-ProteinID: XP_052043403
Position
7:17690031..17789940
AA seq 2640 aa
MKLRLIAFVLILWTETLANQSPGPGPKYADVVFLVDSSDYLGVKSFPFVRTFLNKMISSL
PIEANKYRVALAQYSDALHSEFQLGTFKNRNPMLNHLKKNLGFIGGPLKIGNALQEAHRT
YFSAPSNGRDKKQFPPILVVLASAESEDDVEEASNALREDGVKIISVGVQKASEENLKAM
ATSQFHFNLRTARDLSMFAPNMTQIIKDVTQYRDGTTVALVTAVVPNTPAAVTTPAAVTT
PATVTTPANSVDKTVPFPTSCQKDSLADLIFLVDESVGTTQNLRDLQNFLENVTGSVDVK
ENCMRLGLMSYSDRAQTISSLRSSTNQSEFQQQIQRLSLRSGASNVGAAIEQMRKEGFSE
SSGSRKAQGVPQIAVLVTHRASDDAVREAALDLRLEGVTMFALSIEGANNTQLEDIVSYP
SRQSISTHSSYSHLESYSGNFLKKIHNEIWTQVSIHAEQMELDKTGCVDTKEADIYFLID
GSSSIRKKDFEQIQIFMSSVIDMFPIGPNKVRVGVVQYSHKYEEEFPISRYTDAVDLKKA
VFNIKQLKGLTFTGKALDFILPMIKKGKSERTDGAPCYLIVLTDGKSNDSVLEPANRLRA
EHVTIHAVGIGEANKTQLQQIAGREERVNFGQNFDSLKDIKNEIVHGICSEKGCEDMKAD
IMFLVDSSGSIGPTNFETMKTFMKNLVGKIQIGADKSQVGVVQFSDYNREEFQLNKYSTH
EEIYAAIDGMSPINSNTLTGSALTFVSEYFDLSKGGRPQARKFLILLTDGEAQDEVGGPA
MALRSRSVTIFSVGVYGANRAELEEISGDGSLVFHVENFDHLKALESKLIFRVCALHDCK
RIELLDIVFVLDHSGSIGPREQESMMNLTIHLVKKADVGRDRVQFGALTYSNNPEILFYL
NTYSSGSAIIEHLRRPRDTAGETYTAKALQHSNLLFTEEHGSRLKQNVRQLMIVITDGES
HDRDKLNDTARELRDKGITIFAVGVGNANQDELETMAGKKENTIHVDNFNKLREIYLPLQ
ETLCNNSQETCNLPEADVIFLCDGSDMVSDSEFVTMTTFLSDLIDNFDIESQRMKIGMAQ
YGSRYQEIIELGNSLNKTEWKSQVHSVAQSKGFPRIDFALKHVSDMFDPSVGGRRNAGVP
QTLVVITSSYPRYDVTAAVKVLKDLGICVLALGIGDVYKEQLLPITGNSEKIITFQDFNK
LQNVDVKKRMIREICQSCGKANCFVDVVIGFDISTHRQGQPLFQGHPRLESYLPGILEDI
TSIRGVSCGAGAEAQVSLAFKVDSDQEFPAKFQIYQKAVFDSLLQVAVRGPTHLNAQFLQ
SLWDMFEERSASRGQVLLIFSDGLQDESVTLLEEQSDRLREAGLDALLVVSLNTFGHDEF
SSFEFGKGFDYRTQLTIGMLDLGKKLSQYLGNIAERACCCTFCKCPGIPGPHGVRGLQAS
KGSSGLKGSRGHRGEDGDPGRRGDTGLQGDRGLMGCQGTRGQKGVKGFSGAQGEHGEDGL
DGLDGEEGFYGLRGGKGQKGDPGSQGHPGSRGAPGEDGEKGFPGDPGDPGQDSDIKGQKG
TKGDRGRQGRTGQKGTHGSPSSAGIRGMEGRRGPQGPSGQAGNPGPQGTQGPEGLQGPQG
SSGNRGGKGDQGGQGYQGPQGSPGPVGPRGDIGRPGFGGRKGEPGVPGGPGPVGPPGQRG
KQGDYGIPGYGPTGRKGVKGPTGFPGDPGQKGDAGDPGIPGGPGPKGFKGLTLSQGLKGG
SGLQGSQGPPGRRGPKGTAGQPIYSPCELIQFLRNHSSCWKEKCPVYPTELVFALDQSSG
TTEGRFNETRDTITSIVNDLNVRENNCPVGARVAVVSYDSDTSYLIRGSDYHSKKHLLQL
LSQIKYQVPRKARDIGNAMRFVARNVFKRMSPGANTRRVAVFFSNGQAVNRASILTATME
FSALDISLAVFAYNERVFLDEAFGFDDTGTFQVIPVPSVGGYEPLEKLQRCTLCYDKCFP
NTCAEEPFFPENSYMDVAFLLDNSRNIASDDFQAVKGLVSSVIDSFQITSNPSASESGDR
VALLSYSPPENSRRKGRVKTEFAFTTYDNQSVMKNYIHTSLQQLNGDATIGLALQWAMED
LFLGTPNPRKHKVIIVISAGENHEEKEFVKTVALRAKCQGYVIFVISLGSTQRDEMEELA
SYPLDHHLIQLGRMYKPDLSYIVKFLKPFVYSVRRGFNQYPPSLLKDDCRLVDLERGDAS
GHGLRLTATLHEVSASKNSLASQELNARKDTSFMLEGHGGDHLVYIPNQMLEPHKLASHR
GNDQECVAMASLTSEHESHGRKELGLAYEPGDASLQEYYMDVAFLIDASQQVGGRNEFKE
MRTLITSVLDYFHIAPAPLTSVLGDRVAVLTYSPPGYLPNTEECPVYLEFDLVTYNTVHQ
MKHHLQESLQQLNGDVFIGDALQWTIDNVFVGTPNLRKNKVIFIVTAGETNPLDKEVLRN
ASLRAKCQGYSIFVFSFGPIHNDMELEDLASHPLDHHLVRLGRVHKPDLDYIIKFIKPFV
HSIRRAINKYPSRDLQAKCANLTFPGPENTGTEDSVLLIPEVYKIEVGETELSGDIGSQE
QHFFLLGNSHGNFSESTADLMQKLYLLLSSGELMVKDQEEPCSEETAAPVNDKQGGEDAR
NT seq 7923 nt   +upstreamnt  +downstreamnt
atgaagctccgactgattgcgtttgtcctaatcctctggactgaaaccctggccaaccag
agcccagggccaggccccaagtacgcagatgtggtgtttctggtggatagctccgattac
ctgggagttaagtccttcccatttgtgagaacttttctcaacaagatgatcagcagcctc
cccatagaggccaacaagtaccgtgtggccctggcccagtacagtgatgctctccacagt
gaattccagctgggcaccttcaagaacaggaaccccatgttaaaccacctgaagaagaac
ttggggttcatcggtgggcccctgaagatagggaatgccctgcaggaggctcacaggacc
tatttctctgctccctcaaatggaagagacaagaaacagttccccccaatcctggtggtg
ctagcttcagcggagtctgaggatgatgtggaagaggcttcgaatgcccttcgggaagat
ggggtgaaaatcatctctgtgggggtgcagaaggcttctgaggaaaacctgaaggccatg
gccacctctcagttccatttcaacctcaggactgccagagacctcagcatgtttgccccg
aacatgacacagatcatcaaggatgtgactcagtacagggacggaacaactgtggccctg
gtcacagctgtcgtcccaaacacacctgcagctgtaaccacacctgcagctgtaaccaca
cctgcaactgtaaccacacctgcaaacagtgttgataagacagttccctttcccacatcc
tgccagaaagactcccttgctgaccttatattcttggtggacgagtcagtggggaccaca
caaaatctgagggacctgcagaacttcttggagaatgtcaccggctctgtggatgtgaaa
gaaaactgcatgcggcttgggctgatgagctacagtgacagggctcagactatttcttcc
ctgaggtcaagcaccaaccagtctgaattccagcagcaaatccagaggctctccctccgg
agtggggcgtctaatgttggggctgccattgagcagatgaggaaggagggcttctcagag
tccagtggcagcagaaaggcacagggggtcccccagattgctgtgctggtcacccacaga
gcatcagatgacgcagtgcgggaggctgcactggacctgcgcttggagggcgtaactatg
ttcgcactgagcattgaaggggccaacaacacacagctagaagacatagtgtcataccct
tccaggcagagcatttccacacacagctcctacagtcacctggaatcgtacagtgggaac
ttcctgaagaagatacacaatgaaatctggacccaagtttctatccatgctgaacaaatg
gagctggataaaaccggctgtgtagatacaaaggaggccgacatctatttcctcatcgat
gggtcatccagcatccgtaagaaagactttgagcaaatccagatatttatgtcatctgta
atagacatgtttcccattggccccaacaaagtccgggtgggagttgtgcagtattcacat
aagtatgaagaggaattccccatctctcgctacacggatgctgttgacttgaagaaggct
gtttttaacatcaagcaactcaaaggtcttacgttcacgggaaaagccctggatttcata
ctgccaatgataaagaagggaaagtctgagaggaccgatggagcgccgtgttacctcatc
gtactgactgatgggaagtcaaacgacagcgttctagaacctgccaacagactgagggcc
gagcacgtcaccattcatgccgttgggattggcgaggcgaacaaaacacaactgcagcag
attgctgggagagaggaaagggttaacttcgggcagaacttcgattctctgaaggacata
aaaaatgagattgttcacggcatctgctctgagaaaggatgtgaagacatgaaggcggat
atcatgtttttggtggacagttctggaagcatagggcctacaaattttgagacaatgaaa
actttcatgaaaaatctggtggggaagattcagattggtgccgacaaatcccaagtcggt
gttgttcagttcagcgactataacagagaagaattccagcttaataaatactccacacac
gaggaaatttatgccgccatagacgggatgtctcctatcaacagtaacactttgaccgga
agtgcactaacctttgtaagtgaatactttgatctttccaaggggggccgcccccaggcc
agaaagttcctcatcctcctcacagatggagaagcccaggatgaagttgggggcccggcc
atggctctcaggagcagaagtgtgaccatcttctccgtgggtgtgtatggtgccaacagg
gctgagctggaggagatcagtggagatggcagcctggttttccatgttgagaactttgat
catctgaaggccttagagagtaagctcatctttcgcgtgtgtgctctgcatgactgcaag
aggatcgaactcttagacattgtgtttgtgctggaccactcaggcagcataggtccacga
gaacaggaaagtatgatgaacctcaccatccacctggtgaagaaggcagatgttggcagg
gaccgagttcagtttggagctctcacgtactccaacaatcccgagatccttttctatctt
aacacttactcgagcggatcggccatcattgagcatctaaggaggcccagggacaccgca
ggagagacctacactgccaaggcccttcagcactccaacctcctgttcacagaagagcat
ggcagccgcctgaagcaaaacgtgagacagctgatgattgtcatcacagatggcgagtcc
catgaccgagataaactcaatgacacggcccgggaactcagagacaaaggcatcaccatc
tttgcagtaggtgtaggaaatgccaaccaagatgaactggagaccatggcagggaagaaa
gaaaataccatccacgtagacaattttaacaaactgagagagatttacctgcctctgcaa
gagactctatgcaataattcacaagagacttgtaaccttccggaagctgatgtgattttc
ctttgtgatggctctgacatggtgtctgattcagagtttgttaccatgacaactttcttg
tcagacttaattgataattttgacattgagtctcaaagaatgaaaatcgggatggctcaa
tacgggagccggtatcaggagatcattgagttgggaaactctctgaacaagactgagtgg
aaatctcaggtccacagtgtggcccagagcaaggggtttccacgaattgactttgctctc
aagcatgtgagtgacatgtttgatccatccgttggtgggagaagaaacgctggtgttcct
cagactttggttgttataacatctagctatccacgatatgatgtgacagccgcagtaaag
gtcctgaaagaccttggcatctgtgtcctggctttgggcataggagatgtttataaggaa
cagcttctgcccatcacaggcaattcagaaaaaataattactttccaagactttaataaa
ctacagaatgtggatgtgaagaagagaatgatccgtgaaatttgccagagctgtgggaaa
gccaattgcttcgtggatgtagtgattgggttcgacatttccactcaccgtcagggccag
cctttgttccagggtcatcctcgcttagagtcgtacctcccaggcatcttggaggatatc
acctctatcagaggggtgagctgcggtgcaggtgcagaggcccaggtgagcctggccttt
aaggtggacagtgaccaagagttcccagccaagttccaaatctaccagaaagcagtgttt
gacagcttgttgcaagtcgctgtccgtggaccaactcatctgaatgcacagttcttgcag
tcactttgggacatgtttgaggagagatctgcgtccaggggccaggtcctgctcatcttc
tcagacggtctccaggacgaaagcgtcaccttgctggaagagcagtcagacaggctcaga
gaagcaggactcgatgctctgttggtggtgtcccttaacacattcggccacgatgagttt
tccagctttgaatttggaaaaggatttgactacaggactcagctgaccattggaatgcta
gacctgggcaagaagctctcacagtatctgggaaacatcgcagaaagggcttgctgctgt
accttctgcaaatgtccagggattccaggacctcacggagtccggggactccaagcctcg
aagggttcttcaggtctaaaaggcagcagaggacacaggggagaggacggagaccctgga
agacgaggagatactgggcttcaaggagacagaggactcatgggatgccaggggactcga
ggtcaaaagggagtcaaaggattttcgggagctcagggagaacacggagaggacgggctt
gacggtctggatggagaagaaggattttacggacttcgtggaggaaagggacaaaagggt
gaccctggctctcagggccacccaggttccagaggcgctcctggggaagatggtgagaag
ggtttcccaggggatcccggtgaccccggacaagacagcgacatcaaaggacagaagggc
accaaaggggaccggggaagacaagggagaactgggcagaaggggacacatggcagtcct
agctcggcaggaatcaggggaatggaaggccggagggggccccagggtccctcagggcaa
gcaggaaacccggggcctcaaggtacacagggacctgaaggactgcaaggcccacagggg
tcaagtggaaatcgtggcgggaaaggagaccaaggaggtcaagggtatcagggacctcag
ggttctcctgggccagtaggacccagaggggacattgggagacctggatttgggggaaga
aagggggaacctggagttcctggaggcccaggaccagtggggcccccaggacaacgagga
aaacagggagattatggcatcccgggctatggtcctacaggaagaaaaggagttaagggc
ccaacaggattccctggggacccagggcagaagggtgatgctggagatcctggaattcct
ggggggcctggacccaaaggattcaaaggactgactctctctcaaggcttgaaaggcggg
agtggacttcaggggtctcaaggccctcctggtcggagaggtcctaaaggcacagcaggg
caacctatatattccccctgtgaattgatccagttcctgaggaaccatagttcctgttgg
aaagaaaagtgtcccgtgtatccaacagagctggtatttgctctggaccagtcctccggt
accacagaagggagatttaatgaaacaagggacaccatcacttcaattgtcaatgacctc
aacgtcagggaaaacaactgtcccgtgggagcgcgggttgctgtcgtttcttatgactcg
gacaccagctatctcatccgtgggtctgactaccatagcaagaagcatctcctgcagctt
ctttcccagataaagtaccaagtgccccggaaggccagggacattggcaatgcaatgagg
tttgtggcccgcaatgttttcaagcggatgtctccgggagccaacaccaggagagttgct
gtgtttttcagcaatggccaggcagtcaacagagcatccatcctcacggccacaatggag
ttcagtgccctggatatcagccttgcagtctttgcttataatgaaagagttttccttgat
gaggcatttgggtttgatgacactgggacatttcaggtgattccggttccttcagttgga
ggttatgagccactggaaaagcttcagcgctgcacactttgctatgacaagtgttttcca
aatacctgtgcggaagagcctttctttcctgagaattcctacatggatgttgcattcctc
ctagacaattcccgtaatatcgccagtgatgacttccaagctgtgaaagggctggtgagc
tcggtgattgacagcttccagatcacttcaaacccttcagcctctgagtctggtgacagg
gttgctttgctgagctattctcccccagagaattccagaaggaagggcagggtgaagaca
gagtttgcatttacaacctatgacaaccaatcagtcatgaagaactacatccacacttcc
ctccaacagctcaatggagatgctaccatcggtcttgccctacagtgggccatggaagat
ctcttcctgggaacccccaatccaagaaaacacaaggtcatcattgtgatttcagctgga
gaaaaccacgaagagaaggaatttgtgaagacggtggctttgagggccaaatgtcaggga
tatgtcatttttgtaatttctctgggctccacacaaagagatgaaatggaagaattagcc
agctacccacttgatcaccatctgatacagcttgggagaatgtacaagccagatctgagt
tatattgtgaaatttctgaagccctttgtatactcagtcagacgcggatttaatcagtac
ccgccgtcgctgctgaaggatgactgcagactcgttgatttagagaggggagatgcgtcg
ggccatggcctccgattgactgctacgctgcatgaggtttcggcaagcaagaacagcctg
gccagtcaagagctgaatgctaggaaagacacatcttttatgctagagggtcatggaggt
gaccatttggtttacattccaaaccaaatgctagagccacataagttagcgagtcaccgt
ggaaatgaccaggaatgtgttgcaatggcaagtctcacttctgaacatgagagtcatggc
agaaaggaactgggtcttgcttatgagcctggggatgcttctcttcaagaatattacatg
gacgtggctttcctcattgatgcttctcaacaagtaggaggacgtaatgagtttaaggaa
atgagaactttaataacttcagtacttgattactttcacatcgccccagctccactgacc
tctgtcttaggagacagagtggctgtcctgacctactctcctccaggctatctaccaaac
accgaagaatgcccagtctacctagaattcgatttggtcacttacaacacagttcaccaa
atgaagcatcatctccaagaatctcttcagcagctcaatggagatgtttttattggggat
gcccttcagtggacaattgacaatgtctttgtaggaactcccaatctgaggaaaaacaaa
gttatctttatagtaactgcaggtgaaacaaaccctttagacaaagaagttttaaggaat
gcatctctgagagccaagtgccaaggctactccatatttgtattttcctttggtcctata
cacaatgacatggagttagaagacttagcaagccaccctctggatcatcacttagtccgg
cttggccgggtacacaagccagatttggactatatcatcaagttcatcaagccatttgtt
cattcaatcagacgtgctatcaacaaatatcccagcagagacctgcaagccaagtgtgct
aatctcactttccctggcccagagaatactggcacagaagacagtgtgttactcatcccc
gaggtgtacaaaatcgaggtcggagagactgagctgtctggagacattggctctcaggag
cagcatttcttcctgctagggaacagtcacggcaacttttcagagagcactgctgatctg
atgcagaagttgtacctgctcctctcctctggggaactgatggtgaaggatcaggaagag
ccatgctccgaagagacggcagctccagtgaatgacaaacaaggtggcgaagatgcaaga
tga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
All databases (4)   

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