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KEGG   Alligator sinensis (Chinese alligator): 102384957
Entry
102384957         CDS       T02922                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X2
  KO
K08524  retinoid X receptor alpha
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03320  PPAR signaling pathway
asn04148  Efferocytosis
asn04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:asn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    102384957 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:asn03000]
    102384957 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:asn03310]
    102384957 (RXRA)
Transcription factors [BR:asn03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    102384957 (RXRA)
Nuclear receptors [BR:asn03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   102384957 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 102384957
NCBI-ProteinID: XP_006028680
UniProt: A0A1U7SDP6
Position
Unknown
AA seq 486 aa
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMAAPSLHPSIGPGIGSPLGSAGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPNLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREGMEHHPSRPTRLLGRQEEQAVQEERQRGKDRN
ENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQL
FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNS
AHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKV
YASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE
APHQMT
NT seq 1461 nt   +upstreamnt  +downstreamnt
atggacaccaaacatttcctgccactggatttctccaaccaagtcaattccacctccctg
aactccccgaccagccgggggcccatggctgcaccttccctccatccatccatcggaccg
gggatcggctctccgctgggctcagcgggccagctccactcccccattagcaccctcagc
tcccccatcaatggcatgggccctcctttctccgtcatcagctcccccatgggacctcac
tctatgtcagtcccctccacccccaacctggggtttggaaccggcagcccacagctcaat
tctccgatgaaccctgtcagcagctcagaagacattaaaccgcccttggggctcaatggg
gtccttaaagtgccagcacacccctcaggaaccatggcctccttcaccaagcacatatgt
gccatctgcggggaccgatcttcaggtaaacattacggggtgtacagctgcgagggctgc
aaaggtttcttcaagcgcacggtgcggaaagacctcacctacacctgccgtgacaacaag
gactgcctgatcgacaagcgccagcgcaaccgctgccagtactgccgctatcagaagtgt
ctggccatgggcatgaagcgagaagggatggagcatcatccatcccggcccacaagactt
ctgggaaggcaggaagaacaagctgtgcaagaggagaggcagagggggaaagatcgaaat
gagaacgaggtggagtcgacaagcagcgccaacgaggacatgcccgtggagaagatcttg
gaagccgaactggcagtggagccaaagacagagacgtacatcgaagcaaacatgggcttg
acccccagctcgcccaacgacccggtaaccaacatatgccaagcagcggacaaacagctc
ttcaccttggtggaatgggcaaagagaatcccccacttctcggagctgccgctggatgac
caggtcattttgctcagagcaggctggaacgaactgctcatcgcctccttctcccaccgt
tcgatagctgtgaaagacgggatcctcctagctaccggcctccacgtccatcggaacagc
gcgcacagcgcaggggtcggtgccatctttgacagagtactgacagaactcgtgtcaaaa
atgcgggacatgcagatggacaagacagagctgggctgcctgcgggccatcgttctcttc
aacccagattcaaaaggtctctccaaccccgccgaggtggaggccttgcgtgagaaggta
tacgcgtcgctagaggcatactgcaaacacaaataccctgaccagcctggaaggtttgca
aagctcttgctccgtctccctgccctccgatccatcggcctgaaatgcctggagcacctg
ttcttcttcaagctaataggagatacacccatcgacaccttcttgatggaaatgctggaa
gcgccccaccaaatgacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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