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KEGG   Acipenser ruthenus (sterlet): 117433405
Entry
117433405         CDS       T07327                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:arut04040]
    117433405
Ion channels [BR:arut04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   117433405
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel GPHH IQ Syntaxin-5_N
Other DBs
NCBI-GeneID: 117433405
NCBI-ProteinID: XP_033911527
Position
31:complement(6917652..7003237)
AA seq 1845 aa
MACLLPPTGPDAFRRFTPESLAEIEKQIIKEKAEKERKSHVEAVEEEEAKPSGNLEAGKP
LPFIYGDPPPEIIADPIEDLDPFYSAKKTFIVISKGKTIYRFNAESACYLLSPFNPIRRG
AIKILIHSLFSLIIMVTILTNCVFMAMSDPPSWSKNVEYVFTGIYTFEALVKILARGFCI
GNFTFLQDPWNWLDFCVISMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVKWPPPINDTWVDDSYIVGNDSF
GTLAASYNNTDNSPVSDFDWNEYINNNENFYFLEGSLDALLCGNSSDAGKCPEGFLCLKA
GRNPNYGYTSYDSFGWAFLALFRLMTQDYWENLFQLTLRAAGKTYMLFFVVIIFMGSFYL
INLILAVVAMAYAEQNEATLAEAQEKEEEFQQILEQLKKQEAQMHGPADAHDSQETLASN
KVRKKGGGSEHEFADDEHSLGDDGDKIKDCNGRVMPRIVIDRVSTDEESFAEDEGSKKSG
SQQNMAYLDEPGLQKRTASALSVLTNVLEEIEDAQQKCPPWWYKFANTFLIWDCCPLWIR
FKELVKFVVMDPFVDLGITICIVLNTLFMAMEHYPMSPDFEEVLAVGNLVFTGIFAAEMV
FKLIALDPYYYFQTGWNIFDSIIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTL
NMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINLDCELPRWHMHD
FFHAFLIIFRILCGEWIETMWDCMEVAGQGICLVVFMMVMVIGNLVVLNLFLALLLSSFS
GDNLASSDDDGEMNNLQIAIGRITRGIDFVKSTALGLIQGVLGKKPKEKEDDLKKENFVL
NHMDSEEDPKSDLKCVDAVSGNDTQVVEEVDHTGFLVNPDLTISVPIALGESDFENQDED
DVNSDYEIEETKQQKSGAADSCSTLDYKPFDAEEKVVMEDTPEAEQPEACFTEGCIRRWP
CLTVDITQGKGKTWWTLRRACFAIVEHDWFETFIVFMILLSSGALAFEDVYIEQRKVIKT
LLEFADKVFTYVFVIEMLLKWTAYGYKTYFTNAWCWLDFLIVDVSLISLAANLLGYSELG
PIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNMFA
GKFFKCVNVTSGEMFDTSVINNKTQCLELIEQNFTEVRWMNVKVNFDNVGMGYLSLLQVA
TFKGWMDIMYAAVDSRRIEEQPSYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQ
KKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKVQGLVFDFISRQAFDIFIMV
LICLNMVTMMVETDDQSTEKEEILYYINLVFIVVFTTECVLKMFALRHYFFTMGWNIFDF
VVVILSVVGIMLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPA
LFNIGLLLFLVMFIYSIFAMSNFAYVKHESGIDDIFNFETFGNSIICLFQITTSAGWDGL
LNPILNSGPPDCDPTIDHPGSDVKGNCGNPGMGMMFFTSYIIVTFLVVVNMYIAIILENF
NVATEESGEPLCEDDFEMFYETWEKFDPDATQFIEYSRLSDFCDTLLDPLKIPQPNKIKL
ISMDLPMVTGDKIHCLDILFALTKEVLGDSGDMDALKESMEEKFMAANPSKVSYEPITTT
LKRKHEEIAAIVIQRAYRRHMLKRSVKQVPYIHRQNSKDDKKEEEREAPEKGGLIAEQMC
ENYEKAEASVPKVVVEVTDEVVPLRDPQTTASPTTSGGNIKESIV
NT seq 5538 nt   +upstreamnt  +downstreamnt
atggcatgcctgctccctccaacaggccctgatgccttccgacgcttcactccagagtct
cttgccgagatcgagaagcagatcattaaagagaaagctgaaaaggaaaggaaatcacat
gtagaggccgtggaagaggaggaagccaagccgagcggcaaccttgaagccggcaaaccc
ctgcccttcatatatggtgatccacctccagaaattattgcagatccaatagaggacttg
gatcccttttacagcgcaaaaaaaactttcatagtcattagtaaagggaagacaatctac
aggtttaatgctgagtccgcctgttacctgctgagccctttcaatccaatccggagagga
gccatcaaaattcttatacattcattgttcagtttgatcatcatggtaaccattttaaca
aactgtgtgttcatggcaatgagtgaccctccctcctggagtaaaaatgtagagtatgtt
tttacaggcatttatacctttgaagcactcgtcaagattttagcaagagggttctgtatt
ggtaattttacattcctacaagatccatggaactggcttgatttctgtgttattagtatg
gcgtatctcactgagtttgttgatttgggcaatatttctgcactcaggactttccgtgta
ctacgagcacttaaaacaatcactgttattcctggtttgaaaaccattgtgggtgctctg
attcagtcagtgaagaagcttgcagatgtgatgattctcactgtgttctgtctcagtgtt
tttgctctcattggtcttcagttgttcatgggtaacctaagacaaaagtgtgtcaaatgg
cccccacctatcaacgatacctgggttgacgacagctacattgtaggaaatgattccttt
ggaactttagccgcgagttacaataacacagataatagtcctgttagtgacttcgactgg
aatgaatacatcaacaataacgagaacttctattttcttgagggatctcttgacgcactt
ctctgtggaaacagctcagatgctggaaagtgcccggaaggattcctctgcttgaaggct
ggaaggaatccaaactatggctataccagctatgatagttttggctgggctttcctcgcc
ttattccgtctcatgactcaggactattgggagaacctctttcaactgacactacgtgca
gctggtaaaacctacatgctattctttgtggtgatcatcttcatgggttcgttctacctc
atcaatctgatcctggctgtggttgccatggcctacgcagagcagaatgaagccacgcta
gcagaggcacaggagaaagaagaggagtttcagcagatcttagaacagctgaaaaagcag
gaggcacagatgcatggtccagcagatgcacatgacagtcaagaaacacttgccagtaat
aaagttaggaaaaaaggtggaggttcagagcatgaattcgctgacgatgaacacagcctt
ggagacgatggagacaagatcaaagactgcaatggaagagtcatgcccagaatcgtcatt
gacagggtctctacagatgaagaatcttttgctgaagatgaagggagcaagaagtcagga
tcccaacagaatatggcctatttagatgagccgggtcttcaaaaaagaacagccagtgct
ttaagtgtcctcaccaatgttttggaagagatagaagatgctcagcagaagtgtcccccc
tggtggtacaaatttgccaatacattcctgatttgggattgctgccccctgtggatcaga
ttcaaggaattggtgaagtttgtggtgatggacccctttgttgatctcggtatcacaatc
tgtattgtgctcaacactcttttcatggctatggagcactaccccatgagtcctgatttt
gaggaggtgcttgccgtgggaaacctggtatttactggaatcttcgctgctgaaatggtg
ttcaaactcattgccctggatccctactattactttcagactggttggaacatctttgac
agtatcatcgtcactttgagcttggtagagttgggacttgcaaatgttgagggtctctca
gtgctgcggtcattccgtttacttcgtgttttcaagcttgcaaaatcctggcccaccctg
aacatgctcattaagatcattggcaactccgtgggggctctgggcaacctgaccttggtt
ttggcgattatcgttttcatcttcgctgtggtaggaatgcagctttttggaaaatcctac
aaagaatgtgtctgcaagatcaacctagattgtgaactgcctcgttggcacatgcatgat
ttttttcatgccttcttgattatatttcgaatcctgtgcggggagtggattgagaccatg
tgggactgcatggaggtggcaggacagggaatctgcctggtagtcttcatgatggtcatg
gtgattgggaacttggtggtgctgaacctctttttagccttgctgcttagctcgttcagt
ggcgacaacctcgccagcagcgacgatgatggtgaaatgaataacctgcagattgccatt
ggcaggattaccaggggtatcgactttgtgaaaagcacagctctagggctcattcaggga
gtgctgggcaagaaaccaaaggagaaagaggacgatctgaagaaggaaaactttgtgctc
aaccacatggactcagaagaagaccccaagtcagatttgaagtgtgtggatgccgtgtcc
gggaatgacacacaggtagtggaagaagtagaccacacaggatttctggttaatcctgac
ttgaccattagtgttccaatcgctcttggagaatctgattttgaaaatcaagatgaagac
gatgttaactcagactatgagattgaagaaacaaaacaacagaagagcggggctgcagac
tcctgcagtacattggattacaaaccttttgacgctgaagagaaggtagttatggaggac
acccctgaggctgaacaaccagaagcatgtttcacagaaggctgcatccggcgatggccg
tgtctgacggttgacatcacacaaggcaaaggaaagacttggtggacattaagaagggcc
tgctttgcaattgtggagcacgactggtttgaaaccttcatcgtctttatgattttgctg
agtagcggtgcgctggcatttgaagatgtatatattgaacaacgaaaagtgataaaaacc
ctgttggaatttgcagataaagtgttcacctatgtatttgttattgaaatgcttttaaag
tggactgcctatggttacaagacatacttcacgaacgcttggtgctggctcgattttctc
attgtggatgtttctttgatcagtttagcagcgaacttactgggatattctgaactggga
cccattaaatccctacggacactgagagctttgagacccttgagagcattgtcacggttt
gaggggatgagggttgtggtgaacgccctgcttggtgccatcccatcaatcatgaacgtc
ctgctggtttgtctcatcttctggctcatcttcagtatcatgggagtcaacatgtttgcg
gggaagttcttcaaatgcgttaatgtcacctcgggagaaatgttcgatacttcagttatc
aacaacaagactcagtgtctggagttaatagaacaaaatttcactgaagttcgctggatg
aatgtgaaggttaactttgacaatgtggggatgggatacctttcattactgcaagtggca
accttcaagggctggatggacatcatgtatgctgcagtcgactcccggaggattgaggaa
caaccatcgtatgaaattaacctctacatgtacatctactttgttattttcatcattttt
ggagccttctttactctcaacctctttattggtgtcatcattgacaacttcaatcagcaa
aagaaaaagtttggagggaaggacatcttcatgacagaagagcagaagaagtactacaat
gccatgaaaaagcttggctcgaaaaaaccacaaaagcctattccaagaccacagaataaa
gtccaaggattggtgtttgatttcatctccagacaagcatttgacatcttcatcatggtc
cttatttgcctcaacatggtgaccatgatggttgaaacggatgaccagagtacagagaaa
gaagaaatcctctattatatcaacctggtcttcattgtggttttcactacagagtgtgtc
ctcaaaatgtttgcactcaggcattactttttcactatgggatggaatatctttgatttt
gttgtggtcattctttctgttgttggtattatgctggcagacataatagaaaagtacttt
gtctcaccaactcttttcagagttatcagactggcaagaattggtcgcgttttgcgtctc
attcggggggccaagggaatccgaacgctgctgtttgccttgatgatgtcacttcctgct
ttgttcaatattgggctgcttctcttcctggttatgttcatatattctatattcgcaatg
tcaaacttcgcttacgtaaaacatgagtcgggcatcgatgacatatttaactttgagaca
tttggaaacagtataatttgtttgttccaaatcactacttcagccggctgggacggtctc
ctcaaccctatcttaaacagcggccctccagactgtgatcccactattgaccaccctggg
tccgatgtaaaggggaactgtggcaatccaggcatgggcatgatgttcttcaccagctat
atcatcgttaccttcttggttgttgtcaacatgtacattgccatcatcctggaaaacttc
aacgtggccacagaggaaagcggtgagcctctatgtgaggacgactttgagatgttttat
gagacgtgggagaaattcgaccccgacgccacccagttcatcgaatatagcaggctctca
gacttctgcgacacgctgctagatccgctcaagataccacagccaaacaaaatcaaactc
atatccatggacctacccatggtaactggggacaaaattcactgcctggatatcctgttt
gctctaactaaagaggtgctcggagactcaggagacatggatgctctgaaggaatccatg
gaggagaaattcatggctgccaacccatccaaggtctcctatgagcctatcaccacaacc
cttaagagaaagcatgaggaaattgccgcaattgtcatacagcgagcctacaggaggcac
atgctaaagcgttctgtgaagcaagtgccttacatacatcggcaaaacagcaaggatgac
aaaaaggaggaggagagggaggctccagaaaaggggggtttgattgcagagcagatgtgt
gaaaattatgagaaagcagaggccagtgttccgaaggtggtagttgaggtcacagatgaa
gtcgttccacttcgtgacccacagaccactgcttcccccactacttcaggaggaaacata
aaggaatctattgtataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (11)   

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