[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Acipenser ruthenus (sterlet): 117426794
Entry
117426794         CDS       T07327                                 
Name
(RefSeq) collagen alpha-2(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04510  Focal adhesion
arut04512  ECM-receptor interaction
arut04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117426794
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117426794
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arut04147]
    117426794
   00536 Glycosaminoglycan binding proteins [BR:arut00536]
    117426794
Exosome [BR:arut04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117426794
Glycosaminoglycan binding proteins [BR:arut00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   117426794
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   117426794
SSDB
Motif
Pfam: VWA Collagen VWA_2
Other DBs
NCBI-GeneID: 117426794
NCBI-ProteinID: XP_033900692
Position
12:complement(19145010..19182116)
AA seq 1012 aa
MLLKLLLPCLLFGALSQAQQEPVTDCSTQIKCPINVYFTIDTSESIALQFLPPGGLVDRI
KSFSELFVNKLQEEMYKDHITITWEFGGLHFSDRVEIYSQITSNTNEYIQRLRSIKYLGR
GTFTDCALSNMTSQVVAQASPDNRVRFAVVITDGHVTGSPCGGMKSRAESARDAGIRLFA
VSPSINKYESGLREIANSPAELYRNNYQATGTTGEIHVETIDRIIKVMKQEAYSECYKLT
CLEKPGPPGPKGYRGQKGAKGDIGDVGPLGSKGRQGDPGIEGPIGYPGPKGFHGMKGEKG
ELGSEGKRGVTGLAGRNGTDGQKGKLGRIGAPGCKGDPGDKGPAGYPGDVGERGQEGDPG
SKGDHGRPGRDGPPGPPGEPGQKGEQGSPGSPGLPGQKGRQGERGGGGPKGEPGRRGDPG
TKGGAGPTGPNGEKGDVGPEGQRGLPGEVGNKGAKGDLGLPGPRGISGEIGGSGRNGSRG
DSGDVGQRGEPGAPGPKGDRGRTGFSYPGPRGPTGDRGDKGNPGPQGARGEYGQKGAPGV
KGTGGDPGDPGPTGEPGLRAPQGEPGEPGDPGPEGDPGLTDCDVMTYVRETCGCCDCEKR
CGALDIVFVIDSSESVGLTNFTLEKNFVINVVSRLGSIAKDPKSDTGTRVGIVQYSHDNT
FEAIQLNDSRIDSLATFKDAVKRLQWIAGGTYTPSALRFAYDQLIKGSKRDKAKVFAVVI
TDGRYDPRDDETLLQSLCSGDVIVNAIGIGDMFSRQQEDESLKSIACNDQSRVTGMNLFA
DLVAEEFIDKMEEVLCPDPFVVCPDLPCKTELAVAHCTQRPVDIVFLLDGSERIGLENFR
YARTFVEDVARRLTLARNKDDELNARMALLQYGSEAEQRVAFSLSHNLTVIADSLAQMRY
LDSSSNVGSAIIHAINNIVNGQGGSQRVARRNAELAFVFITDGITGSKSLSEAVTSMRKV
DVVPTVIAVGDDVDMNILLQIGLGDRTAIFREKSFSQLSKSSFFDRFIRWIC
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgctgttgaagctcctcctcccttgcctgctgttcggagctctgagccaggctcagcag
gaacccgtgacggattgctcaacccagatcaagtgtccgatcaacgtatatttcaccatc
gacacgtcagagagcatcgccctgcagtttcttcctccggggggcctggtggatcggatc
aagtccttctcagagctttttgtgaataagctgcaggaggagatgtacaaggaccacatc
acgatcacctgggagttcggggggctgcacttctccgatcgagtggagatctacagccag
atcaccagcaacaccaatgaatacatccagcgcctgcgcagtatcaagtacctgggccga
ggcactttcacggactgcgccctgtccaacatgacctcccaggtggtggcccaggcctcc
ccggataaccgcgtgcgctttgccgtggtgatcaccgacgggcacgtgacgggcagcccc
tgcgggggcatgaagtccagggcagagagtgcccgggacgcggggatcaggctcttcgcc
gtgtcccccagcattaacaagtacgagtcggggctgagggagatcgccaacagccctgcc
gagctgtaccgcaacaactaccaggccaccgggaccacaggagagatccatgtggaaacc
atcgaccgcattatcaaagtcatgaaacaagaagcctattccgagtgttacaaactgact
tgcttggagaagccggggccccctggtccaaagggctacagaggacagaagggtgcaaaa
ggagacatcggggacgtaggacctcttgggagcaaaggaagacaaggggatccaggtatt
gaaggtccgattggttaccctggtcccaaggggtttcatggtatgaaaggcgaaaagggg
gaactgggatctgaaggaaagaggggtgttaccgggcttgctgggcggaatggaacagat
ggacagaagggcaaacttggacgtatcggagctccaggttgcaaaggggatcctggtgac
aagggccccgctgggtatcctggtgatgttggagagaggggacaagaaggagaccctggt
tctaagggagaccacggccggccaggcagagacgggccccctgggccccccggagagcca
ggacagaagggagagcaaggaagtccaggatcccctggccttcctgggcagaaaggaaga
cagggagaaagaggcggaggtggacctaaaggagaaccggggcggagaggggaccctggt
accaagggcggtgccgggccgactggccccaatggagagaagggagacgtcggccctgag
gggcagaggggacttcctggagaagtaggaaacaaaggagccaagggagacttgggactg
ccaggacccagaggcatttccggagaaatcggcggttcaggaagaaatggctcccgtgga
gattctggtgatgtgggacagagaggggaacctggagctccaggaccaaagggcgacagg
ggaagaacaggattcagctaccctggcccacgcggacccacgggtgatcgtggtgataaa
ggtaacccaggacctcagggagcacggggtgaatacggacagaagggagcccctggtgtt
aagggcactggtggagacccgggtgatccaggacctactggggagcccggactgcgagca
ccccaaggagaaccaggagagccgggagatcccggccctgaaggagatcccggcctgaca
gactgtgatgtcatgacctacgtcagagagacctgtggatgctgtgactgcgagaagcgc
tgtggggctctggatatcgtctttgttattgacagctctgagagtgtggggctcaccaac
ttcaccctggagaagaactttgtgatcaacgtggtgagcaggctgggctccatcgccaag
gaccccaaatcagatacaggcactcgtgttggcattgtccagtacagccacgacaacacc
tttgaggccatccagctgaacgactcacgcattgactcgctggccaccttcaaggacgct
gtgaagaggctgcagtggatcgcggggggcacctacaccccctccgccctgcgcttcgcc
tacgaccagctgatcaaaggcagcaagcgcgacaaagccaaggtcttcgctgtggtcatc
acagacgggcgctatgacccgcgagacgacgagacgctcctgcagtccctgtgcagtggc
gacgtcatcgtcaacgccatcggcatcggggacatgttcagccgccagcaggaggacgag
agcctgaaatccatcgcgtgcaacgatcagagccgcgtaaccgggatgaacctgtttgca
gacctggtagccgaggagttcatcgacaaaatggaggaggtgctgtgcccagatccattt
gttgtttgcccggaccttccctgcaaaacagagcttgccgtagcgcactgcactcagcgc
ccagtcgacatcgtcttcctgctggacggctcggagcggatcggcttggagaacttccgc
tacgcccgcacctttgtggaggacgtggcgcggcggctgaccctggcccgcaacaaggac
gatgagctgaatgcacgcatggccctgctgcagtacggcagtgaggccgagcagagagta
gccttctccctgtcgcacaacctgaccgtcatcgcagacagcctggcgcagatgagatac
ctcgactcctcctccaacgtgggctctgccatcatccacgccatcaacaacatcgtcaat
ggccagggggggagccagagagttgcccggcgcaacgcggagctcgccttcgtcttcata
acggatggcatcaccggcagcaagagcctctcggaggctgtcacctccatgcgcaaggtc
gatgtcgtccccacggtgatcgccgtgggtgacgatgtagacatgaacatcctgctgcag
atcggactgggagaccggacggccatcttccgagagaaatccttctcccagctctccaag
tccagcttctttgatcgcttcatcaggtggatctgttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system