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KEGG   Amphiprion ocellaris (clown anemonefish): 111588825
Entry
111588825         CDS       T06018                                 
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03320  PPAR signaling pathway
aoce04148  Efferocytosis
aoce04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    111588825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aoce03000]
    111588825
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:aoce03310]
    111588825
Transcription factors [BR:aoce03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    111588825
Nuclear receptors [BR:aoce03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   111588825
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 111588825
NCBI-ProteinID: XP_023155151
Ensembl: ENSAOCG00000004653
Position
Unknown
AA seq 444 aa
MSSQQPNSSASNSPTNILGSPFSVISPSLNSPVVSPSLGFGPISNSQISSSAPISGMHSI
SSSEDVKPPFGLRPMPAHSPGIMLSQKRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVIKHVKWIKEDGRDEGWMTVQE
ERQRNREREGELEFSVGVNDEMPVEKILEAETAVEQKTELHSDGGSAGNSPHDAVTNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIPLKDGVLLASEL
QREGAHSAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNP
DAKGLSNTSEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtcctcacagcagcctaacagctcagcctccaacagccccaccaacatcttgggttct
cctttttcagtcatcagtccctctctcaactctccagtggtctcaccctctctgggcttt
ggacctatcagcaacagccagatctcttcttcagcacccatatcagggatgcactcaatc
agcagctcagaagatgtcaaacctccgtttggcctgaggcccatgccagctcacagccct
ggaataatgctgtctcagaaacgtctgtgtgtcatctgcggagaccgctcctctggcaaa
cactacggagtgtacagctgcgagggttgcaagggtttctttaaacgaactgtgcgcaaa
gacctgagctacacttgcagggataacaaagagtgcctggtcgacaagcgccagcgcaat
cgctgccagtactgccgctaccagaagtgcctagccatgggtatgaagagggaagtgatc
aaacatgtaaagtggataaaagaagatggaagggatgagggatggatgacggttcaggag
gagcgccagaggaaccgagagcgtgaaggagagctggagttcagtgtcggagtgaatgac
gagatgcctgtagagaagatcctcgaagcagaaacagctgtggagcagaagaccgagctt
cactctgacggaggctctgcaggaaactcgccccatgatgctgttaccaacatctgtcag
actgcagacaagcagctgtttgccttggtggagtgggcaaagagaatccctcatttctct
gagttgccccttgatgatcaggtcattcttctgcgtgcagggtggaatgagctcctgatt
gcctcgttctcccatcgctccattcctctgaaggatggagttcttctggcttctgagctg
caacgtgaaggcgcacacagtgcaggagttggagccatttttgatagggagagtgtgcag
agtgcagaagtcggcgccatatttgacagggttcttactgagcttgtcaataaaatgaga
gatatgcaaatggacaaaacagagttgggttgcctccgagccatcgtcctgttcaaccca
gatgctaaagggctctccaacaccagtgaggtggagctccttagagaaaaggtctatgca
tcattggaagcctactgcaaacagaaatatccagagcagcagggaaggttcgctaagctc
ctccttcgactgccagcactgcgatccattggcttgaagtgcttggagcatctcttcttc
ttcaagctgatcggtgacacgcctattgacactttcctcatggaaatgcttgaggctccc
catcagttgtcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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