[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Alligator mississippiensis (American alligator): 102577020
Entry
102577020         CDS       T03087                                 
Symbol
SCN4A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 4
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amj04040]
    102577020 (SCN4A)
Ion channels [BR:amj04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   102577020 (SCN4A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel GPHH IQ FUT8_N_cat Lustrin_cystein
Other DBs
NCBI-GeneID: 102577020
NCBI-ProteinID: XP_019331363
Position
Un
AA seq 1828 aa
MASPPYLPGPDNLRLFTRESLAAIEQRIAEEEALKLKRQHVEVLDEEERKARSDLEAGKS
LPLIYGDPPPELIGVPLEDLDPFYRDQKTFIVLNKGKSIFRFSATPAVYLLGPFNPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTMSDPPPWSKNVEYTFTGIYTFESMIKILARGFCI
DSFTFLRDPWNWLDFSVIVMAYTTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVRWPPPFNETIPENIFGMDNDTF
VNATLYGNLTGSGNNTFDYDAYMNNEGNFYFLEGALDALLCGNSSDAGKCPEGYECMKAG
RNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVLIIFLGSFYLI
NLILAVVAMAYAEQNDATALEIQQKEEEYQKLLEQLKKHQEEQAKMLKDRKLSACSATQK
KKGDSDQDADSDQDKLKDCNGRVVPKVVLERSATVRERNPSDDQDKVDYNHLAVGPQDGP
SLQKRAESVTSIISSTMEELEEAHRKCPPWWYKFAKTFLVWDCCLPWLKLKAFVKLIVLD
PFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKLIALDPYDY
FQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV
GALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISADCTLPRWHMHDFFHAFLIVFRI
LCGEWIETMWDCMEVAGQAMCLLVFMLVMVIGNLVVLNLFLALLLSSFSADSLAASDDDG
EMNNLQIAIGRITRGIDFVKKTVLMLLHRQWKEKKDPDEEQEESKTDNYVLNHMDSGQDS
KSDFMDGVAGKEHISVDHVDHMNFINNPNLTVQVPIASEESDLYDETSTQSDTEDTKKPL
SHGSTSSMGSTVDYKPPVAEVEEVVEEATEGTEPENCFTEACVQRFPFLYVDITTDKGKI
WWNLRKTCFKIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKVIRTILEYADKIFSYVF
VIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCINTTTDE
LFEIEVVNNKSDCLALLDTSQVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDS
REIEEQPLYETNLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPQNQIQGVVYDFVTKQVFDITIMVLICLNMVTMMVETDD
QSEAKIEILQTVNLIFIIIFTGECVLKMFALRYYYFTIGWNIFDFVVVILSIVGLVLSDV
ISKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
SIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLLNPILNSGPPDCDPH
LENPGSSVKGNCGNPSMGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDD
FEMFYETWEKFDPDATQFITYSTLSDFVDTLQEPLKIAKPNKIKLVTMDLPMVPGDKIHC
LDILFALTKEVLGDSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQR
AFRRYLLKRSVKQASYLYRHSKEEDTLMEEAPEKEGLIASKMNWNYGTGEVETAPTLSLK
PVLSSETPGAPSEAKKLDEKRNVKESFV
NT seq 5487 nt   +upstreamnt  +downstreamnt
atggcaagcccgccatacttaccaggtccagacaacctccgcctttttacccgcgaatct
cttgctgcaatagaacagcggattgctgaggaggaagcgctcaagttaaagcggcagcat
gtggaagtgctggacgaagaagaacgaaaggcccgtagtgatctagaagctggaaagagc
ctcccacttatttatggggacccacctccagaactcattggggtgcctctagaagaccta
gaccctttctacagagatcaaaagacattcatagtcctaaacaaagggaaatcaatcttc
cgattctcagcaacccctgctgtctacttactgggacccttcaaccccatcagaagaggt
gccatcaaagtgcttatacattcattattcagtatgttcatcatgatcaccattttaacc
aactgtgtgtttatgacgatgagcgaccccccgccgtggtccaagaatgtggaatacacc
ttcactggaatatatacctttgagtccatgataaagatcctagcaagagggttttgcatt
gacagttttacattcctgcgagatccgtggaactggctggatttcagtgtcattgttatg
gcttataccacagagtttgtggatttgggaaatatctctgctttaagaacgttccgtgtc
ctccgtgcactgaaaacgattacagtaattccaggactgaagaccattgttggagccttg
atacagtctgtgaagaagctctccgatgtcatgatactcacagtcttctgtctcagcgtg
tttgcacttattggtcttcagttgttcatgggcaaccttcggcacaaatgtgtcaggtgg
ccaccccctttcaatgagactattccagagaacatctttggaatggacaatgacaccttt
gtgaatgcaacactctatggcaacctgactggatctggtaacaataccttcgattatgat
gcttatatgaacaatgaagggaatttctacttcctggagggagcgcttgatgccctgctc
tgtgggaatagcagcgatgctgggaagtgccctgaaggctatgaatgtatgaaagcggga
aggaacccaaactatggctacactagttatgacacatttagctgggctttccttgctctc
ttccgcctcatgactcaggattactgggagaacctcttccagctgactctacgtgcagct
gggaaaacttacatgatcttctttgttctgattatattccttggttccttctacctcatc
aacctgatcctggctgtggtagccatggcatatgcagagcaaaatgatgctactgcactg
gaaatacagcagaaggaggaggagtatcagaagcttctggaacagctgaaaaagcaccag
gaggaacaagcaaaaatgttaaaagaccgtaagttaagtgcttgctctgcgactcagaaa
aagaagggcgactcggaccaagatgcagacagcgaccaagacaaattgaaagactgcaat
ggcagagtcgtccccaaggttgtgctggagcgatctgctacagtaagggaacgcaatccc
agcgatgaccaagataaagtggattataaccacctggcagtgggcccacaagatggtccc
agccttcagaagagagcagagagtgttaccagtattatctctagcaccatggaagagtta
gaggaagctcacaggaagtgcccaccctggtggtataaatttgccaaaacgttccttgtc
tgggactgctgtcttccgtggctgaaactgaaggcgtttgttaagctgatagtgctggac
ccttttgtcgacctggggatcaccatctgcatagtgctcaacacactgttcatggccatg
gaacactatccaatgactgaagagtttgagaatgtgctgactgtggggaacctggtcttt
actgggatcttcactgctgagatggttttaaagctcatagctttggacccatatgactac
ttccagcagggttggaacatatttgacagtatcatcgtcaccctgagcttggtggagctg
ggcctggctaatgtgcaggggctctctgtgctccgatctttccgtctgctcagagttttc
aagcttgccaagtcctggccaaccctcaacatgctcataaagatcataggcaactccgtg
ggcgctctcgggaacctcacccttgtgctggccatcattgtcttcatctttgctgttgtg
ggcatgcagctgtttgggaagagctacaaggaatgtgtgtgcaagatctctgctgactgc
acactgccccgctggcacatgcatgacttcttccatgccttcctcattgtcttccgcatc
ctgtgcggagagtggattgagaccatgtgggactgcatggaggtggcaggccaagccatg
tgcctcctcgtcttcatgttggtgatggtcattgggaacctcgtggtcctgaacctgttc
ttagctttgctgctgagttccttcagtgctgatagccttgcagcttctgatgatgatgga
gagatgaacaatttgcagattgctattggcaggatcactagggggattgactttgtaaag
aaaactgtcctaatgctacttcacaggcagtggaaggagaagaaagacccggatgaggag
caagaggagagtaagacagacaactatgtcctaaaccatatggactctggccaggattcc
aagtcggattttatggatggagtagctgggaaagagcatatctctgtagatcatgtggat
cacatgaatttcattaataaccccaatctgactgtccaagtgccaattgcctcagaggaa
tctgacctctacgatgaaacaagcacccagtctgacacagaagacaccaagaagccgctg
tcccacgggagcacatcatccatgggtagcaccgtagattacaagccaccagtagctgag
gtggaggaggttgtggaggaggctacggagggcaccgagcctgaaaactgcttcactgag
gcttgtgtgcagaggtttcccttcctttatgttgacattacaactgacaaagggaaaata
tggtggaaccttcggaaaacctgcttcaagatcgttgaacacaactggtttgagaccttc
atcatctttatgatcctcctcagcagcggagccctggcttttgaagacatctatatcgag
cagcgtaaggtcatacgtaccatcctggaatatgccgacaagatcttctcctatgtcttc
gtcattgagatgctgctcaagtgggtggcctatggcttcaaagtatatttcaccaatgcc
tggtgctggctggattttctcattgtcgatgtttccattatcagcttgacagcaaactgg
ttgggatactcagaactgggagccatcaagtcactgaggactctgagagctttgagacct
ttgcgagctctgtccagatttgaaggcatgagggtagtagtaaatgccctgctgggagcc
atcccctccattatgaatgtcttgctggtctgtctgatcttctggctgatattcagcatc
atgggtgtgaacctgtttgcggggaaatactaccggtgcatcaacaccaccacagacgag
ctctttgaaatcgaagtggtgaataataaaagcgactgcttggccctccttgataccagc
caggtccgatgggtgaatgtcaaggtcaactttgacaatgttgggttaggctacctctct
ctgctgcaggtggccacctttaaaggctggatggacatcatgtatgcagcggtggactcc
cgtgagattgaagagcagccactgtatgagaccaacctctacatgtacatctacttcgtc
atcttcatcatctttggtgcctttttcactctcaacctcttcattggggtcatcattgat
aactttaatcagcaaaagaaaaagtttggaggaaaggacatcttcatgacagaagagcag
aagaaatactataatgccatgaaaaagctgggatcaaagaaaccccagaagccaatcccc
aggccccagaaccaaattcaaggcgtggtgtatgactttgtaacaaagcaagtgtttgac
ataactatcatggtcctgatttgtcttaacatggtgaccatgatggttgaaacagatgac
caaagtgaagccaaaattgaaattctccagactgtcaacctgattttcatcatcatcttc
actggcgagtgtgtgctcaaaatgtttgccctgcgctactattacttcaccattggttgg
aatatctttgactttgtggtggtcattctctccattgtaggtctcgtcctttcagacgtc
atttcgaaatattttgtgtcacccaccctctttagggtgattcggctggccaggattggg
cgtgttcttcgtctaatcagaggagcaaaaggcatccggactctgctctttgccctcatg
atgtccctaccagctttgttcaacattggactcctgctcttcctggtgatgtttatctac
tctatcttcgggatgtccaactttgcctatgtgaagaaggagtctgggattgatgacatc
ttcaactttgaaacttttggtaatagcatcatttgtttgttccaaatcactacatcagca
ggatgggatggcctcctcaaccctatcctgaacagcggccctccagactgcgacccccat
ttggagaaccctggcagttcagtgaaaggaaactgtgggaatccatctatgggcatctgc
tttttctgtagctatatcatcatttccttcctgattgttgtgaacatgtatattgccatc
attcttgagaacttcaacgttgctacagaggagagcagcgaacccctttgtgaagatgac
tttgagatgttttatgaaacatgggagaaatttgatccggatgccacccagtttatcacg
tacagcaccttatctgactttgttgacaccttacaagagccacttaaaattgccaagcca
aacaagattaaattggtcaccatggatttaccaatggtccccggggacaaaatccactgt
ttggacattctgtttgctctgacaaaagaagtcttgggtgactcaggagaaatggatgct
ttgaaagaaacaatggaggagaaatttatggctgcaaatccatccaaggtttcctatgaa
cccatcactacaactttgaaaagaaaacatgaagaagtatgtgccataaaaatccaaaga
gctttccgcaggtaccttttaaagcggtccgtgaaacaagcctcttacctctacaggcat
agtaaagaggaggacaccctaatggaagaagcaccagagaaagaaggactgatcgcaagc
aaaatgaactggaattatgggacaggagaagtagaaacagccccaaccctgtctcttaaa
ccagttctaagttcagagactccgggtgctcccagtgaagcaaaaaaattggatgagaaa
cgtaatgtgaaagaatcatttgtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system