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KEGG   Alligator mississippiensis (American alligator): 102572696
Entry
102572696         CDS       T03087                                 
Symbol
CHPF
Name
(RefSeq) chondroitin polymerizing factor
  KO
K00747  chondroitin polymerizing factor [EC:2.4.1.175 2.4.1.226]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
amj01100  Metabolic pathways
Module
amj_M00058  Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:amj00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    102572696 (CHPF)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:amj01003]
    102572696 (CHPF)
Enzymes [BR:amj01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.175  glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
     102572696 (CHPF)
    2.4.1.226  N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
     102572696 (CHPF)
Glycosyltransferases [BR:amj01003]
 Glycan extension
  O-Glycan
   102572696 (CHPF)
SSDB
Motif
Pfam: CHGN Fringe
Other DBs
NCBI-GeneID: 102572696
NCBI-ProteinID: XP_019348174
Position
Un
AA seq 612 aa
MTVVTHGDERPIWNMYQTVRHLLDHHVAEFDWFFLVQDDTYTEAHRVARLVAHLSIDTQL
YLGRPEEFIGGDTEGRYCYGGFGYLLSRSLLLRLQPHLENCRNDILSARPDEWLGRCIID
YTAINCVDEHEGLRYQYFELGKNTDPERETDPRFHGAFTVHPVLDPVQMYRLHKHFAQVE
LERTYQEIQQLQLEIQNTSSLSADGDHSATWPVGIPPPFQPKTRFEVLRWDYFTEEQVYA
CVDGAPKCELRGVDLADVADVVATAMEELNRKYQPALHLRKQQLVNGYRRFDPTRGMEYT
LDLQLEVVTQKGHSRSLTRRVHLVRPLSEVEIIPMPYVTEASRINVILPLTAHDRDRAGR
FLEAYAAAAFESGENAVLTFLFIYDPFEAQQVAQNDVFAAVKAKITEYERKYAEVKIPWI
SVKTDAPSPIKVMDIISKKHPVDTLFFVAGVGTEVTIDFLNRCRMNTINSWQVFFPIHFQ
GYHPAIAYPHQVPPAILELGRDAGHFDRHAFHEACFYNADYMAARTRLAGDAQENEDILE
TLDIYDMFVKYSSLHVFRAVEPALLQRYQQQACNPRLSEDVYHRCVQSSLEGLGSRSQLA
MVLFEQEQGNST
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgacggtggtgacccacggcgacgagcggcccatctggaacatgtaccagaccgtccgg
cacctgctggaccaccacgtggccgagttcgactggttcttcctggtgcaggacgacacg
tacacggaggcgcaccgtgtggcacgcctggtcgcccacctcagcatcgacacgcagctc
tacctgggccggcccgaggagttcatcgggggtgacactgaggggcgctactgctacggc
ggctttggctacctgctgtcgcgcagcctgctgctgcgcctgcagccgcacctggagaac
tgccgcaacgacatcctcagcgcccgccccgacgagtggctgggccgctgcatcatcgac
tacaccgctatcaactgcgtggatgagcacgagggcctgcgctaccagtactttgagctg
gggaagaacacggacccggagcgggagaccgaccctcgcttccacggcgccttcaccgtg
caccccgtgctggaccctgtccagatgtaccggctgcacaagcactttgcccaggtggag
ctggagaggacctaccaggagatccagcagctgcagctggagatccagaacaccagcagc
ctgtccgcggacggagaccacagtgccacgtggcccgtgggcatcccaccgccgttccag
cccaagacacgctttgaggtgctgcgctgggactacttcacagaggagcaggtgtacgcc
tgtgtggacggcgctcccaagtgtgagctgcgtggcgtggacctggcagacgtggctgac
gtggtggccacagccatggaggagctgaaccgcaagtaccagccagcactgcacctccgc
aagcagcagctggtgaacgggtaccggcgctttgaccccacgcggggcatggagtacacg
ctggacctgcagctggaggtggtgacacagaaggggcacagccgctcgctcacccggcgc
gtgcacctggtgcggcccctcagtgaggtggagatcatccccatgccctacgtgacggag
gccagccgcatcaacgtcatcctgccactgacggcccatgaccgcgatcgcgcaggccgc
ttcctggaggcctatgcggcggccgccttcgagagcggcgagaacgctgtgctcaccttc
ctcttcatctacgacccctttgaggcccagcaggtggcacagaacgacgtctttgccgcg
gtcaaggccaagatcaccgagtacgagcgcaagtacgcagaggtcaagatcccctggatc
agcgtgaagacggacgcgccctccccaatcaaggtcatggacatcatctccaagaagcac
cccgtggacacgctcttctttgtggccggtgtgggcaccgaggtcaccatcgacttcctc
aatcgctgccgcatgaacaccatcaacagctggcaggtcttcttccccatccacttccag
ggctaccacccggccatcgcctacccccaccaggtgccgcctgccatcctggagctgggg
cgggacgcgggccacttcgaccgccacgccttccacgaggcctgcttctacaacgccgac
tacatggcggcgcggacccgcctggcgggcgatgcgcaggagaacgaggacatcctggag
accctggacatctacgacatgttcgtcaagtactccagcctgcacgtcttccgggccgtg
gagcccgccctgctgcagcgctaccagcagcaggcctgcaacccccgcctcagcgaggac
gtctaccaccgctgcgtgcagagcagcctggaggggctgggctcccgctcccagctggcc
atggtgctctttgagcaggagcagggcaacagcacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (8)   
   KEGG ENZYME (2)   
   KEGG REACTION (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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