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KEGG   Astyanax mexicanus (Mexican tetra): 103026006
Entry
103026006         CDS       T05042                                 
Symbol
col6a4a
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
  KO
K06238  collagen type VI alpha
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
amex04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103026006 (col6a4a)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103026006 (col6a4a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amex04147]
    103026006 (col6a4a)
   00536 Glycosaminoglycan binding proteins [BR:amex00536]
    103026006 (col6a4a)
Exosome [BR:amex04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103026006 (col6a4a)
Glycosaminoglycan binding proteins [BR:amex00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103026006 (col6a4a)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   103026006 (col6a4a)
SSDB
Motif
Pfam: VWA VWA_2 Collagen Kunitz_BPTI DUF1194
Other DBs
NCBI-GeneID: 103026006
NCBI-ProteinID: XP_022529874
Position
6:complement(18619610..18703697)
AA seq 2801 aa
MGLIKGLLSFFILSSCYLSSSAQKTVCTQEALADIVFLVDGSWSIGTENFQRMREFLFTL
VDSFDVGLEKVRIGLVQYSTTVHTEFLLNGYNSKQEILDYISNLPYRGGGTKTGLGLDFL
LRYHFKEEAGSRAKKGTPQIAVVITDGQSQDNVEPYAQELKQKGIILYAIGIKDADMDQL
KEIASQPHDQHIYSVSDFTALQGISQSFITVLCSTVEEEAKRQVTQVPDCRANLADIVFL
VDGSSSIGDADFLRMKRFLHAFIQGLEISADSIRVAVVQFSNNPHEDIPLGDYADKNELL
EKVDRLVYHRGNTETGKALNFIKDRYFTQAGRIQARANVPRIAVVITDGDSADDMKTPAQ
ELRREGVLIFTIGVGEVNMAELQSIANKPHQRFVISFVNYEALVNAASNMMNTVCISMED
KQRALAPKYSDVFVLVDSSSQQIANIRKFLIQLATQLDVGAKVNRMALIQFGGEVNVEFL
LNAYNTRREAIALIQKFQLRSSGRSNLGQAMDYVRTRLLNSESGSRIAQGFKQYLLVVGK
GETDTAVLRATRALKAEGVKIVEVDTSKRVDIVFSGALPGSSGVPVLDKTVIAPGRTFFS
ATQDLTNIVQDVKDSINVPDVISVSGDCKSAQVADIVFIVDASDAISDSNFNLVRDFLHS
LIKGLDVGSDSMRIGMVLYGNEPKAEFYLKTFDNKPDILQYIQILPYKGGKANTSKALKF
AREKVFSKELGSRRARGVLQIAFVITEGESPDDVTSEASKLRRSGVRVYALGIQHKNVTQ
LMQIASYPPRKYVYNVDSFAKLNIMEQFLRKTLCNNVMRRTVAKINQFNIKQGCLQTEEA
DIYFLIDHSGSIEPPDFQDMKKFILEVLLHFNIGPKQVRVGVVKFESTPTLEFTVTQYGD
RASIEGAVSNIVQIGGGTETGRALTFMRPYFIEARKTRDTRVREILIVITDGESTDEVKQ
PAAALKSQGVSIYAVGVKQANKTQLLEMASSPSKMFFVENYDSLKPLKDEIVTDICSEDA
CKQMMADIIFLVDGSWSIGAEGFSKIKKFVNNTVSRLKIGKDSVQVGLMQFGTNPRTEFQ
LNSYYDKVQMMRAVSQTVHAETNPEIGKALNELPKFFGPTKGGRQNAPKFLILITGAESK
DDVNAPAKALRDKGVTIYSIGIGEAKSLQLRNISGSPKQVYMERNLDALDLLDENLLLKI
CNSADDCQKTQVADVVFLVDGSTSIAEEDFDKMKIFMNLVVNNTEVGENYVRFCTIVYSN
TPEVKFNLKKHYTKREVNNAISELKAPTGDTYTASALQYSIRFFSKAEGGRAEDGVPQLM
FVITDGEATDHWDLPTPARKLHGLGINVFGIGVGEAKEDELMTIASNPKNVFKVDNYEAL
KSLHQNISNVLCNNSKPECSTVAADLVILIDGSESIEDAPWNTMINFMMSFADSLRVRED
LFRIGVAQFSTGYKKEFYLNEHMEPAAIKKAIKDIKQMKDGTNIGNALYQVDEFFQSAAG
SRINSGISQNLLLITDGKSNDNVYNATDRLRARNINMFVIGIGQISMKQIEYIAGSQDRV
FVLDSFDALKLNTTILEVISHICQQGEESECTVDIGVGFDVSRISASSQSLFTGQNKLQT
YLPEIIRYISTLNNLCCLKEPTLQTKTGFQVVARDGTMLYDTNFETYNEEVIKKLLAVQI
AQPLAFNSQLLRSFQLKHAASTTGVKIVIIFSDGLDDSADVLMRASQDLRNSGVDALLIV
ALDGVQSTVELQRLEFGRGFGYKEPLTIGMQSVASAIHKQIDSVTLRECCNVMCKCAGQE
GMRGPRGPSGIKGNPGQKGHPGFPGEEGGIGERGPPGLNGSQGHQGCAGKRGLKGSRGYR
GDMGEDGEHGLDGVDGEQGLTGASGSSGERGDAGGPGQRGIRGTRGVPGEKGLRGDPGET
GQNNTERGPKGELGNPGIQGETGQDGNPGTPGESGKSGQKGRRGTVGLPGPRGPPGAPGL
QGTPGAPGPMGPSGPNGAPGQKGTPGLPGPQGPPGSPGGIGSKGNIGLRGQKGQLGDPGD
KGSAGPQGPRGLPGTDGPDGYGLSGPKGQKGDIGFPGHPGLQGESGDRGPTGSNGPKGNR
GRGGNAGRPGDIGNPGSAGPPGHRGPKGPKGIRGMSTCQLITYVRDNCVCCKANAACPAY
PTELVIGLDMSDGVTPVLFERMRTTLVTLLEGLNIAESNCPTGARVAVVSYSSNTKYLIR
FSDHRRKKDLLEAVKNIALERTSNQRDIGAAMRFVGRNVFKRVRQGVLMRKVAVFLTVGQ
SQDLTSITTAVLEYKAQDINLGVIAFRNVPNVRRAFEADETGSFILFVLERPRDQATALE
RIQQCVVCYDPCTPAVGCPRVPEVPVAKEVDLDLALLVDGSRNIQEAQYEGVKGVLNTLL
DQIVVSRQPSKTDRQARVALYQQSSTYSEAQASVRQIFNFQQFQDHSQMKQSIFQNLQQT
GGSSRLGHAVEFAIMRGLLTAPKPRKNKMLLVFVGEETDFYDRAKLDFISRMAKCQGIVT
FILTVGEHFNNTQVEELASLPMEQHIIHLGHVKQRERDYAQRFVRTFFHILNREMNTYPP
PSLRRQCDILQQSQGQGQGQGQGGVDIYTDVYETAERLPIDRIPLSTPAYPEEEEEVEEE
EVEEVVVERGTNQVKIVYRNGTLMTPGRGDSNAQCSLSMDSGTPCGQYVQRWYYDKAVGA
CSPFWYGGCSGNSNRFKTEFECINTCILTSDVALDRTEVSTEDVCLLKNDQGPCRAYLLK
WFYDTQQNECARFWYGGCKGNGNRFDSQEECEDRCVTLQTA
NT seq 8406 nt   +upstreamnt  +downstreamnt
atggggttgataaaaggacttctgtctttcttcattttatcatcatgctacctttccagc
agtgcccagaaaactgtttgcacacaggaagccttggctgacatcgtgttcctggtggat
ggctcatggagtatcggcacagagaacttccagaggatgcgcgagttcctcttcaccttg
gtggacagtttcgacgtgggccttgaaaaagtgcgaattggcctagtacagtacagcacc
acggtccacaccgagttcttacttaacggctacaactctaaacaagagattcttgactac
atctcaaatctgccatacaggggtggtggcactaagacaggtctgggcttagacttcctc
ctaaggtaccactttaaagaagaggcagggagccgcgctaaaaaagggacacctcagatc
gctgtggtaatcacagacggacagtcacaggacaatgtggagccgtacgcccaggagctg
aagcaaaaaggcatcatactctatgctattgggattaaagatgctgacatggatcagctg
aaggagatagcctcacagcctcatgaccaacacatctacagtgtgtccgatttcacggct
ctgcagggaatctcccagagcttcatcactgtactctgctccacagtggaggaggaggct
aaacgtcaggtgacccaagtgccagactgcagggcgaacttggctgacattgtgttcctg
gtggatggttctagtagcattggtgatgcagatttcctgagaatgaagcgcttcctccac
gcattcatacagggtcttgaaattagtgccgacagtatcagggtcgcagtggtgcagttc
agtaataaccctcatgaagatatcccgctgggcgactacgcagacaaaaacgagctcctg
gagaaggtggacagactcgtttaccacagaggcaacactgaaactggaaaagccctcaac
tttattaaagacagatacttcactcaagcaggcagaattcaggcccgtgcaaatgtgccc
cgcattgccgtggtgatcacagacggagattcggctgatgatatgaagactccggcccaa
gaactgagaagagaaggggttttgatcttcaccattggggttggggaagtcaatatggcg
gagctgcagtccattgccaataaaccacatcagcggtttgtgatcagctttgtaaactat
gaggcactggtgaacgctgcttccaacatgatgaacacagtgtgcatctcgatggaggac
aagcaacgggctctggctccaaagtattccgatgtgtttgtgttggtggacagttcatct
cagcaaattgctaatataagaaagttccttattcagcttgccactcaactcgacgtgggg
gctaaagtcaaccggatggctctgattcagtttggcggcgaagtaaacgttgagttcctt
ttaaatgcttacaataccagaagggaggcaattgctcttattcagaagttccagctcaga
agcagcgggaggagcaacctcggacaagcgatggactatgtgcgcactcgtctccttaat
tctgaatcaggaagccgaattgcccagggtttcaagcagtatctactagtggtgggcaaa
ggagaaactgacaccgctgtgctgagggcaacacgtgcattgaaggctgaaggagtgaag
attgtcgaggttgatacaagcaaaagagtcgatatagtattttccggagctcttccaggg
agttcaggtgttccggttttggataagactgtgatagctcctggaagaaccttctttagt
gccactcaagatttaacgaacatagtacaagatgtgaaggactccatcaatgttccggac
gtgattagtgtcagtggagactgcaagtcagctcaggtggcagatattgtgtttatcgtg
gacgcgtcggacgccatctctgattctaatttcaatctggtgcgggactttctccacagc
ttgattaaaggcctggatgtcggctccgacagcatgaggataggaatggtgctgtacggt
aacgagcccaaggctgaattctacctaaagacatttgataacaagcctgacatcttgcag
tacattcagattttgccgtacaagggcggcaaggccaacaccagcaaggccttaaagttt
gcccgagaaaaagtcttcagcaaagaactgggcagccgacgcgcccgaggggtgctgcag
atcgctttcgtcatcacagagggggagtcgccggacgatgtcacatcggaggcctccaag
ctgaggcgctccggggtgagggtctacgctctgggaattcaacacaaaaatgtgacacaa
ctgatgcagatcgcatcttaccctcccaggaagtatgtgtacaatgtggacagctttgct
aagctcaacataatggaacaatttctcaggaagactctgtgtaacaacgtcatgcgtaga
actgttgccaaaattaatcagttcaacataaagcaaggatgtctccagacagaagaagcc
gacatctatttcctcatcgaccactctggaagcattgaaccaccagactttcaggacatg
aaaaagttcattctggaggttttgctgcattttaatatcgggcctaaacaggtccgtgtg
ggagtggtgaagttcgagagtacacctacattagagtttacagtgacgcagtacggagac
agagcttccattgagggagctgtgagtaacatcgtccagataggtggaggcacggagaca
ggcagggccctgacattcatgaggccgtattttattgaggccagaaagacacgcgacaca
agggttcgcgagattcttattgtcatcactgatggagagtccacggatgaggtgaaacag
ccagcagcagctctgaagagtcagggggtgtccatctacgccgttggtgtgaaacaggcc
aacaaaacccagctgctagagatggcatcaagcccaagcaagatgttctttgttgaaaac
tatgattcactgaagcctctcaaagatgaaattgttacggatatttgctcagaagacgcc
tgcaagcaaatgatggcggatatcatctttttggttgacggttcgtggagcattggtgct
gagggcttctcgaagatcaagaagtttgtgaataatacagtctccaggcttaaaataggg
aaagacagcgtacaggttgggctaatgcagtttggcaccaacccacggactgagtttcaa
ctaaactcttattatgacaaagtgcagatgatgagggctgtcagtcaaactgtccatgct
gagacaaatcctgagattggaaaggcacttaatgagctgccaaagttctttggtccaacg
aaaggaggacgccaaaatgccccaaagttcctcattctgatcacaggcgctgagtctaag
gatgatgttaatgctccagccaaagcccttagagacaagggggttacaatttactccata
ggcattggcgaagctaaaagcttacagctaaggaatatcagtggatctcccaaacaggtg
tacatggagaggaatttggatgccttggatttgttggatgaaaacctgttgctgaagatc
tgcaactctgctgatgactgtcagaaaacgcaggtggcggatgtggtcttcttggtggac
ggttcaacaagcattgccgaggaggactttgataaaatgaagattttcatgaatttagtg
gtcaacaacacagaagttggagaaaattatgtccgcttttgtactattgtctactctaac
acccctgaggtcaaattcaacctgaaaaagcactataccaaacgagaggttaacaatgct
atcagtgagctgaaggctcctacgggagatacctacacagcttcggctctgcagtattca
atacgcttctttagtaaggccgaaggtgggcgagctgaagatggtgtcccgcagttgatg
tttgtcatcacggacggtgaggccacagaccattgggatttgcccacacctgctcgtaaa
cttcacggtcttggaattaatgtattcggcattggagtgggggaggcaaaagaagatgag
ctaatgacgattgcctccaacccgaagaatgtttttaaggttgacaactatgaagctttg
aaatccttgcatcaaaacatctccaatgtgctgtgcaacaattccaaaccagaatgttcg
acggtggcagcagatttggtcattttaatcgatggctctgaaagcatcgaagacgcgcca
tggaacaccatgataaactttatgatgagctttgctgacagccttcgtgtcagagaagac
cttttcagaataggcgtagcccaattcagcactggatataagaaggaattctacttgaat
gaacatatggagccagcagccataaagaaggcaatcaaagacatcaagcagatgaaagat
gggactaatattggaaatgctttgtatcaagttgatgagttctttcaatctgcggcgggc
agccgtataaatagtggcatttcccagaacctgctactgatcactgatggaaaatcgaat
gacaatgtctataatgctactgatagactgagagccaggaatattaatatgtttgtcatt
ggaatagggcaaatctccatgaaacagattgagtatattgctggttcgcaagacagggtg
tttgtcttggactcctttgacgccttgaaactcaatacaacaatcctggaggtcattagt
catatttgccaacaaggtgaagagtcagaatgcactgtagacattggtgttggatttgac
gtctcccgcatcagtgcaagttcacaatcgctcttcaccggccagaataagctgcagacc
tacctgcctgagattatcagatacatttcaactttgaacaatctgtgctgtctcaaagag
cccactctacaaaccaaaacaggcttccaggtggttgctagggatggaacgatgctctat
gatactaactttgagacgtataatgaggaagtgataaagaaattactggctgtacagatt
gcacaacctttggccttcaattcccagcttctacggtcttttcaacttaagcatgcagcc
tccacgactggtgtgaagatcgtgattatcttctctgatggcctagacgattccgctgat
gtccttatgcgtgcctcacaggatctcaggaatagtggtgtggatgcgctgctgatagta
gcgctggatggagtccagagcaccgtggagctgcagaggctggagtttggacgaggattt
ggctacaaggagcctctcactattggcatgcagagtgtggccagtgccatacacaagcag
attgattctgtgacgttgagagagtgctgcaatgtgatgtgtaagtgcgccggccaagaa
ggtatgcgaggacctcgaggaccttcagggataaaggggaatcctggacagaaaggacac
ccgggatttcctggagaggagggaggaattggagagagagggcctccaggtctgaatgga
tctcaaggacatcaaggctgtgctggtaaaagaggcctaaagggcagcagaggctacagg
ggtgacatgggagaagatggagagcatggtttggatggagttgatggagaacagggtctg
actggagcttcgggatcttctggagagcgtggagatgcaggaggcccaggtcaaagaggt
atcagaggaactcgaggtgtgccgggagaaaaggggctccggggggatccgggtgaaaca
ggccaaaacaacaccgagcggggtcctaaaggtgagcttggaaacccaggaatacagggt
gagacaggacaagatggaaacccaggaacacctggagagtctggaaaatctggtcaaaaa
ggaagacgaggcactgtggggctaccgggtcccagagggcctccaggagcaccgggacta
caaggaacccctggggctccagggccaatggggcccagtggtccaaatggtgctccagga
cagaaaggaaccccaggtctaccaggaccccagggtccccctggttctccgggaggaatt
ggatctaaaggaaacataggactgagaggacaaaagggtcaactaggggatcctggagat
aagggatcagctggaccacaaggccctagaggacttccgggaactgacggtccagatgga
tatggattatcgggacctaaaggacagaagggagatattggtttcccaggtcatcctggg
cttcagggtgaatcaggggatcgtgggccaactggaagtaatgggcctaaaggcaacaga
ggaagagggggaaatgcaggaaggccaggtgacataggtaatcctggttctgctgggcca
cctggacacaggggcccaaaaggacctaaaggaatcagaggaatgtctacctgtcaactg
attacctatgtccgagacaactgtgtttgctgtaaagctaatgccgcttgtcctgcatac
cccactgaactggtcattgggctggacatgtctgatggtgtgacgcctgtcctgtttgag
aggatgcgcaccactcttgtcactctgctggaggggctcaacattgcagagagcaactgt
cccactggagcccgagttgctgtggtttcctacagctccaacaccaagtacctgatccgc
ttctctgaccaccgccgcaagaaagacctgctggaggcggtgaagaacatcgctttggag
cgcacgtccaaccagcgagacattggagcagccatgcgctttgtggggaggaatgtcttt
aaacgtgtgcgacagggtgtactgatgaggaaggtggcagttttcctgactgttggacag
tcccaggatttgacatccattaccacagctgtactagaatacaaggctcaggacatcaac
cttggcgttattgcatttaggaatgttccgaatgttcgtcgtgcttttgaggctgatgag
accgggagttttattttgtttgtgctggagagaccacgggaccaggcgacagcacttgag
aggatccaacagtgtgttgtttgctatgatccctgcaccccagctgtaggatgtcccaga
gtccctgaagtacctgttgcaaaagaggtggacctggacctagccttgctggtggatggt
tcccggaacatacaggaggctcagtatgaaggagtaaagggagttttgaacactcttctg
gaccagattgtagtaagtcgtcagcccagtaaaaccgacaggcaagctagggtggctctg
taccagcaaagctccacctacagcgaggcacaggcatcagtcaggcaaatattcaacttc
cagcagttccaggatcacagccagatgaagcagagcatcttccaaaacctacagcagact
ggtggatcctccaggctgggccatgccgtggagttcgcaatcatgaggggtcttctcacg
gctcccaagccacgcaagaacaagatgttgcttgtctttgttggggaggagacggatttt
tacgacagagcgaaactggactttatctccagaatggcgaaatgccaaggcatagtaacc
ttcatccttacagttggggagcacttcaacaacacccaggtggaagagcttgccagcctc
cccatggagcagcacataattcacttaggccacgtgaagcaacgagagcgagactatgcc
caacgctttgtgaggactttcttccacattctgaacagggaaatgaacacataccctcct
ccatcgcttagaagacagtgtgacattttacagcagagtcagggccagggacagggccag
ggacagggtggtgttgatatttacactgatgtctatgagaccgctgaaagacttcccatt
gacaggattcctctgtcaaccccggcttaccccgaagaggaggaagaggtggaggaggaa
gaggtggaggaggtcgtagtagagagagggaccaaccaggtgaagattgtctatagaaat
gggaccctaatgaccccaggacgtggagactcaaatgcccagtgttcgctgagtatggac
agcggcaccccgtgtggacaatatgtgcaaaggtggtactatgataaagctgtcggtgca
tgctcacccttctggtacggaggttgcagcggtaacagcaacaggtttaaaacggaattc
gaatgcatcaacacatgtatcctaaccagtgatgtggcgctagacaggacagaagtttca
acagaagatgtgtgtctgctgaagaacgatcaagggccctgcagagcatacctactcaag
tggttctacgacacacagcagaacgagtgcgctcgcttctggtacggaggctgtaagggg
aacggcaacagatttgacagtcaggaggagtgtgaagaccgctgtgtgacactgcagacc
gcatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (114)   
   KEGG ORTHOLOGY (1)   
   RefGene (110)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (130)   

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