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KEGG   Anneissia japonica (feather star): 117116704
Entry
117116704         CDS       T08613                                 
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
ajc  Anneissia japonica (feather star)
Pathway
ajc04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ajc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    117116704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ajc03000]
    117116704
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ajc03310]
    117116704
Transcription factors [BR:ajc03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    117116704
Nuclear receptors [BR:ajc03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   117116704
SSDB
Motif
Pfam: Hormone_recep zf-C4 tRNA_bind_3 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 117116704
NCBI-ProteinID: XP_033116695
Position
Unknown
AA seq 481 aa
MDSMSELDSISPISAMSSVQCPTTTMGSSPLSAHSHSGLGSPPMSHPLGHMQSPNLSSMS
SASSHEDIKPVISNPVIYAPPHSSMPGIPHLQIPGGHSMSSSQLSGGATSPMGQMPGQSI
HKSICAVCGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACRDERNCIVDKRQRNRCQYC
RYQKCIAMGMRREAIVLTAVQEERQRKDKCSGDGEVESTSGSNNDMPVEKILEAELAVEP
NTDTYVDTQNDPVTNICQAADKQLFTLVEWAKRIPHFSELILDDQVTLLRAGWNELLIAA
FSHRSIAVTNGILLATGLHVHRNSAHTAGVGTIFDRVLTELVAKMREMRMDKTELGCLRA
IVLFNPDAKNLTSVQKIIHNARRVATDPMNSLPFVYSTDAKNLSSVQKVEELREKVYASL
EEYCRTQYPEESGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPNN
S
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggatagtatgtcagaattagattcaataagtcctatatcagccatgagttcagtacag
tgtccgaccactaccatgggttcctcgcctctctctgcacattcacatagtggtctcggt
tcaccgccaatgtctcacccgctcggtcacatgcagtcaccgaatttatcaagcatgagc
tcggcatcatcacatgaagacattaaaccggtcatctcaaatcccgttatctatgctcca
ccgcattcgtccatgccagggataccccacctccagatcccaggtggtcattctatgtcc
tcaagccaactctccggtggagccacttctccgatgggacagatgccaggacaaagcata
cataaaagcatttgtgctgtgtgtggagatcgtgcatcgggcaaacattatggtgtgtat
agctgtgaaggatgtaaaggattcttcaaacgaacagtacgtaaagatttatcatacgcc
tgccgagatgaaagaaactgcatagtagataaacgtcaaaggaatcgatgccagtattgc
agatatcaaaagtgtattgccatgggaatgagaagagaagccattgttttgacagccgtt
caagaagagaggcaacgcaaagacaagtgcagtggagatggggaggttgagagcactagt
gggtcgaacaatgatatgccagtagagaagatactggaggctgagttagctgtagaacca
aacacagatacatatgttgacacacagaatgacccagtgaccaacatatgtcaggctgca
gataaacagttgttcacattggtggaatgggccaagaggattcctcatttctcagagcta
attctagatgatcaagtgacactccttagagcaggatggaatgagttattaattgctgct
ttctcacatcgctccattgctgttacaaatggaatccttttggcaaccggtttacatgta
caccgaaacagcgcccatacagccggtgttggcactatatttgaccgtgtcctcacagaa
cttgttgccaagatgagagaaatgagaatggataaaacagagcttggctgtctcagggcg
atagtccttttcaacccagatgccaagaatctaacctcagtacagaaaatcatacataat
gccaggcgtgttgctacagatccaatgaacagtcttccctttgtttattcaacagatgcg
aagaatctctcctcagttcagaaagtggaagagctacgggagaaggtttacgcatcactg
gaagagtactgtcggactcagtatccggaggagtctggcaggtttgctaaattgcttcta
cgattaccagcgctacgatccatcggacttaaatgcttggaacatctcttcttttttaaa
ttgattggtgacacccctattgatacatttctaatggaaatgttagaggcacctaataat
agctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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