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KEGG   Anoplopoma fimbria (sablefish): 129108164
Entry
129108164         CDS       T09102                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:afb04040]
    129108164
Ion channels [BR:afb04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   129108164
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel GPHH
Other DBs
NCBI-GeneID: 129108164
NCBI-ProteinID: XP_054475825
Position
19:complement(29137899..29172238)
AA seq 1655 aa
MTSRKMSFFEMWRSKKERGELLKRANQLRLRPPQLRRLLGDSGVRAALKNTRMASLLPPV
GTEVFRRLTPASLRKIQQQHEDEEMELQTRKRSKEVTENDQPKPASDLEAGKPLPFFYGN
PPPELQNTPLEELDPFYQSQKTFIVLSKDNIIHRFDAERACYLLSPFNPLRTVAIKILTH
SLFSLFIMVTIMTNCVLMTMCHPPGWSKTVEHIFTAIYTFEAIMKVVSRGFCVNKFTFLR
DPWNWLDVMVIITGLLTEFVDFGKVSVLRTVPRVLKIIPVIPGLRMTVGALVQSLKGLAS
VIVLMVLCLSVLALIGLQLFMGNLKSKCVILWPESTGIHYNESINNSINYYFLPHQYDAL
LCGNSSDSGRCPEGFTCLKAGNNPNYGYTNFDSFGWSLLSVVRLMTKDFWENLVQMTLRA
AGKLYMTFFVLVVFPGCFCVLSLTVAVVAMASSERDEDAVTKLKQREEDFGRILEAIKRR
EEEEQAACRAALSPEPDGENTESMDGPDKDQRSCPPCWSVFADCLLKWNCCGCWRWLKQG
LYIFTTSLFFELGVVICLILNIIFTCMEHFPMTEHFERMLSEAQLVFTMIFIAEMVLKLV
AMDPYGYFQVGWNIFDSIIVAISLLELSVVVSLRLFVVMRVFRLARWWPSFHMLIKVIWT
SVRALRNLCLFLLVMVFIFSLVGMQLFQQDYKEHVCRIAIDCQLPRWHMNDFFHSFLVII
RALCGEWIDITWDCMEVSGPTTCLIFFLMVLVIGNLLVLNLFLTLLLSSFTTDCLEDPEE
EEKSNLQIAIRQINRALGTLLGKNNHVNPSHPEVDTKEVSRKKYLDSTFVASNQPVSEVK
DLICDHGNLTSDSQCVSYANEEKTPEDEEEKEKRRHPEIQQHEDSDDQIGDTPEDCCSDK
CYHCCPFLDVDTSHGRGRVWSNFRRACFSIVQHKCFKGIIISIILLSSAALVFEDIHLQH
RQVLNMVLERADQVFTCFFLIEMILKWIAFGLKKYFSDAGSWVDFLILQVYLVSLAADTF
GFSEVGAFQSLRTFRALGLLRVISRIPGPKVVVQALVRTGPSMFNFLLVSLVLWMVFSIV
GVNLFAGKFQYCFNETSEEIFLSEDVNNQSDCLFLMFENFTEVRWKNAELNYDNVLNGFL
TLLHLGASSDCSDVMYSAVDTTWVDSQPVYDSNMYMYLYFICFTICNFFTFNYFIRVIID
NLQRDKSAVKPIFMTKEQQEHGRTFTTRLMKPQKLAPRPQNCFQAQLFDLVTNRGFRVVM
AVVICLNMVTMMVETDQQSQETDTILYMLHFVFIVIFFTEFILKIIALRKHYFTDGWNIL
DFVVISVSIIGLFFQDLLEKYFCSPSLVIVLRVVHIFRIFYSVRGIGKLLNAFMMSLPAL
FNIVLLLFIIHFTSSIFGMLNFAYVKREYMIDDMFNFETFGSSMICLLMMSTSASWGGLL
SPMMKSSPDCEPDMENPGSVIRGNCGSPAVAIVFLVTHICLTFLLVVHLYIAVILETFKS
EDAETLSDDDFQMFYKTWKKFDPEASQFIQYSELSDFCDALQDPLRIPKSTPIKLTHMDL
PLLPEEKIHCSDVLHALSTQVLGDSGKMNAFKAKMEEKFMANLSKMSCEPISSTLQGKQE
DREHVLQQRDDKETAVESEGGGGGGGVSAPHCSSL
NT seq 4968 nt   +upstreamnt  +downstreamnt
atgacgagcagaaaaatgtccttttttgagatgtggaggagcaagaaggagagaggagaa
cttctgaagagagccaatcagctgagactccgtcctccacagctgaggcgattgctaggt
gacagtggggttcgggcagcgctgaagaacaccagaatggcgtccctgctgccccctgtt
ggtacggaggtcttcagacgcttgacaccagcttctttaaggaagatccaacaacaacat
gaagatgaggagatggagctccagacgaggaagaggagcaaagaggtaacagaaaacgac
cagccaaaaccagccagtgacctggaggccgggaagcccctcccattcttctacggaaac
ccgccccctgagcttcagaacaccccattggaggagctggatcccttctaccaatcacag
aagacgttcatcgtgctcagtaaagacaacataattcacaggtttgatgctgagcgggcc
tgttacctgctgagtccattcaacccgctgaggactgtcgccatcaagatcctcactcac
tctttattcagtttgttcatcatggtgacgattatgaccaactgtgtgttgatgacgatg
tgtcatcctccagggtggagcaagactgtggaacacattttcacagccatctacaccttt
gaagccatcatgaaggttgtttccagaggcttctgtgtcaacaagttcaccttcctcaga
gatccctggaactggctggacgtcatggtgatcatcacaggattgctgacagagtttgtg
gactttggcaaagtttctgtgctgaggacagttcctcgagtcctgaagatcataccagtc
atcccaggtctgaggatgactgtcggagctctcgtccaatcactgaagggactcgctagt
gtcatcgttctgatggtgctctgcctcagtgtcttggctctgattggtctgcagctcttc
atgggaaatctgaagtccaaatgtgtcattttgtggccagaaagcactgggatccattac
aatgagagcattaacaactcaataaactactacttcctgcctcatcaatacgacgctctg
ttgtgtggaaacagctctgattccgggcgctgtccggagggcttcacctgtctgaaggcg
ggaaacaacccaaactacggctacaccaactttgactcgtttggttggtctctgctgtct
gtggtcagactgatgaccaaagacttctgggaaaacctggtacagatgacgttacgagca
gcaggtaaactctacatgaccttcttcgtgctcgttgtcttccctggctgcttttgcgtc
ctcagtctcactgtggcggtcgttgccatggcgtccagtgagcgggatgaagacgccgtc
accaagctcaaacagagagaagaagacttcggtcggatcctggaagcaataaagagaaga
gaggaagaggagcaggcagcctgcagggcggcgctctcaccggagcctgatggtgaaaac
acagagagcatggatggtccagacaaggaccagaggtcttgtcctccgtgttggtctgtc
ttcgccgactgcctcctgaagtggaactgttgtggctgttggcggtggctcaaacagggg
ctctacatcttcaccaccagcctgttctttgagctgggggtcgtcatctgcctcattctc
aacatcatcttcacttgcatggagcattttccaatgacggagcactttgagaggatgctg
agtgaagcacaattggtcttcacaatgatcttcatagctgaaatggtcctcaaactcgtg
gccatggacccatacggatacttccaggtaggctggaacatctttgacagcatcatcgtc
gccatcagcctgctggagctgtctgtcgttgttagtcttcgcttgtttgtagtgatgcga
gtgttcaggctggccaggtggtggccatccttccacatgttgattaaggtcatctggacc
tcggtgagagctctgaggaacctgtgtctcttcctgcttgtcatggtcttcatcttcagc
ctggtcggcatgcagctgttccagcaggactacaaggaacacgtctgtcgcatcgcaata
gattgccagcttcctcgttggcatatgaatgacttcttccactccttcctcgtcatcatc
agggccctgtgtggagagtggatcgatatcacgtgggactgtatggaggtctcaggtccg
accacgtgtctgatattcttcctgatggtcctggtcatcggaaacctgctggtcctgaat
ctgttcctgaccttgctgctgagctcgttcaccactgattgtctggaggatccagaagaa
gaagaaaaaagcaacctgcagatcgccataaggcagatcaacagggctttggggactttg
ctgggaaagaacaatcatgtcaacccaagccacccagaggtagacactaaggaagtcagc
aggaagaagtatctggactctacctttgtggcctcaaaccagcctgtttcagaggtcaag
gacctcatctgtgaccatggcaacctgaccagcgactcccagtgtgtctcctacgccaat
gaagagaagacacctgaagatgaagaagaaaaagagaaaagaagacatcctgaaatccag
cagcacgaagacagtgatgatcagattggagacacgcctgaggactgctgcagcgacaag
tgttatcattgctgtccgttcctggacgtagacacgtcccatggaagagggagggtctgg
tctaacttcagaagggcatgtttctccatcgtccaacacaaatgcttcaagggcatcatc
atctccatcatcctgctgagcagtgcagctctggtgtttgaggacattcacttgcagcac
cgtcaggtgttgaacatggttctggagagggcagatcaggtgttcacctgttttttccta
atcgagatgattctcaagtggatcgccttcggactcaagaaatacttcagcgacgccggg
agctgggtcgacttcctcattttacaggtctatctggtgtctctggccgctgacacgttt
ggattctctgaagttggagcctttcagtctttgaggacttttagagctctggggctcctc
agggtcatttcgcgcatcccgggcccgaaggtggtggtgcaggctctggtccggaccggc
ccgtccatgtttaacttcctgctggtgtctctagtcctctggatggtcttcagcattgtg
ggagtgaatctgttcgctgggaaatttcagtactgtttcaatgagacgtcagaggaaata
ttcttatctgaggatgtgaacaaccagtccgattgtctctttctgatgtttgaaaacttc
actgaggtccgctggaagaacgcagagttaaactacgacaacgtgttgaacggtttcctg
acgctgctacacctgggggcttcatcagactgttcggatgtcatgtactcagctgtggac
accacatgggtggattcacagccggtctatgactccaacatgtacatgtacttgtacttc
atctgtttcaccatctgcaatttcttcactttcaactacttcatcagagtcatcattgac
aacctgcaaagagacaagtctgcagtgaaacctatttttatgacaaaggagcagcaggaa
catggtaggacttttacgacacgtttgatgaaacctcagaaactggctccacgacctcag
aattgcttccaggctcagctctttgacctggtgactaaccgtggttttagagtcgtgatg
gcggtggtgatctgcctcaacatggtgaccatgatggtggagacggaccagcagagccag
gagacagataccattctgtatatgctccacttcgtcttcatcgtcatcttcttcacagaa
ttcattctcaagatcatcgccctcagaaagcactacttcaccgacggctggaacatcctg
gacttcgtggtgatctcagtctccatcatcggccttttctttcaagacctcttagagaaa
tacttctgctcgccttctctcgtcatcgtgctgcgagtggttcatatctttcgtatcttc
tactcggtcaggggtatcgggaagctgcttaatgccttcatgatgtcacttcctgccctc
ttcaacattgtccttctcctgttcatcatccacttcacctcctccatcttcggcatgtta
aactttgcctatgtgaagagggagtacatgatcgatgacatgtttaacttcgagactttt
gggagtagcatgatctgtttgttaatgatgagcacttcagcttcatggggcggtcttctg
agtcccatgatgaaatcgtcgccggactgcgaacccgacatggagaacccaggatcggtg
atcagaggcaactgtggcagcccggcagtcgccatagtcttccttgtcacccacatctgc
ctgaccttcctgctggtggtccacctgtacatcgctgtcatcctggagaccttcaagtct
gaggacgccgagacactgagtgacgacgacttccagatgttttataaaacctggaagaag
tttgacccagaagcctcgcagtttatacagtacagtgagttgtcagatttttgcgatgct
ctgcaggatcctctgaggattcctaaatcaacccccatcaaactgacccacatggatctg
cctctacttcctgaagagaaaatccactgctcggacgtgcttcatgcactctccacacag
gtgttgggtgactcaggaaaaatgaacgccttcaaagctaaaatggaggaaaagttcatg
gccaatctgtccaagatgtcatgtgaaccaatcagcagcaccctgcagggaaaacaggag
gacagggaacatgtcctgcagcaaagagatgataaagagacagccgtggagtctgagggt
ggtggtggtggtggtggtgtttcagctccacactgctcctccctttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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