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KEGG   Anoplopoma fimbria (sablefish): 129099230
Entry
129099230         CDS       T09102                                 
Symbol
cacna1db
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04010  MAPK signaling pathway
afb04020  Calcium signaling pathway
afb04218  Cellular senescence
afb04260  Cardiac muscle contraction
afb04261  Adrenergic signaling in cardiomyocytes
afb04270  Vascular smooth muscle contraction
afb04530  Tight junction
afb04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:afb04040]
    129099230 (cacna1db)
Ion channels [BR:afb04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   129099230 (cacna1db)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 129099230
NCBI-ProteinID: XP_054464357
Position
12:762354..801540
AA seq 2054 aa
MALFFAVCLLLSGALLCCHDISVTALLSLSFPFPSSIRLFSVVLEMITKDADSGGQSGGK
PGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGL
ELFIGKMHATCYVIPVTGALAEEEPTPCAVSGHGRHCLLNGTSCREGWQGPNNGITNFDN
FLFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEF
SKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGDEEGKRNPSMPSE
TESANIENHKGEENKSPCCGPLCQKITKSKFSRQWRRWNRFCRRKCRAAVKSVTFYWMVI
ILVFLNTLTIASEHYNQPDWLTEVQDVANKVLLAMFTLEMLVKMYSLGLQAYFVSLFNRF
DCFVVCGGIVETILVELAIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSI
ASLLLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGEDWNTV
MYDGIMAYGGPASSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEEE
AKKRKNSAKDMNTDKKRVEIMDVKDGEIKVPAEVLLEEDKESYSAIDSPACDDDDDNGIL
PDVPPGPRPQRLSELTIKEKTPPIPTGSAFFIFSSTNPFRVFCHKLINHQIFTNLILVFI
MLSSVSLAAEDPIRNFSARNIILGYFDYAFTAIFTVEILLKILGYADYVFTSMFTFEILI
KMTAFGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAIN
RAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSPEDCK
GTYILYNNGDTALPMVKDRIWYNSDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNRE
NMGPIYNYRIEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCV
EYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHHGQSHLFNYA
MDILNMVFTGVFTVEMILKLIAFKPRGYVGDAWNVFDALVVIGSVVDIILSQNYFADAWN
TFDALIVVGSVVDIAITEINSAAIPVVKVIVEPGNTEDSARISITFFRLFRVMRLVKLLS
RGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQT
FPQAVLMLFRCATGEAWQEIMLACLPGKLCDSESDYNPGEERTCGSGFAIIYFITFYMLC
AFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRR
IQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANE
ELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGRR
SWERLNTTMALQAGLRTLHDIGPEIRRAISCDLQEAGLVEANGEEEEEIYRRNGGLFGNH
VSADQQGYFHPTTVTQRPLQILPFSSSASNEPTQTGRTASEADGGEETEMNSSPIQYNHH
YHTPHPHNYPHCVPACHQSPIPSNANLNNANVPSLLSMTNGRQQKCLLRGDRPSSTKNGS
SASTHRKGVHDRLWKSHSTRTRYYEAYIRSETGGGLYSTIRREEPGGGDSDDERGSGEYF
SGEEFHEDGIMLTKDRLSNKDDHDAEVDFDLGVSRSDQKPDGYFDDDQQPIYQDGRRSPR
RWLLPSPQASNRPTFSFECLRRRSSQDDAPLSPSCTALPLHLVQQQVMAVAGFDASRIHR
LSPTRSLCSWVTPPASPISRECLPSYTPLIQVDWRSPGSVSSIPGAVKRSSWYTDGQDSP
HSRSHSPSLLQLPAECCSHKLQKRGSANSVVEAVLISEGLGKYARDPKFVSATKHVIADA
CEMTIDEMESAASNLLNGSMDNSNTGGTGSVGSDPNATEHLRDCSIRDYSDEEPYVALKC
EEDLADEMICITSL
NT seq 6165 nt   +upstreamnt  +downstreamnt
atggctttgttttttgctgtctgcctcttgctttcaggtgctttgctctgttgtcatgac
atctctgtcactgctctcctctcactctctttcccgtttccctcttccatcaggttgttc
agtgtggttctggagatgataaccaaagacgctgactctggcggccagtctggaggcaaa
cccggggggtttgatgtcaaggccctccgagcttttcgcgtgcttcgtccccttcgcctt
gtctctggagttcctagtttacaggtggttttaaactccattattaaagccatggttcct
ctgcttcacatcgctctgctggtcctctttgtcattatcatctacgccatcatcggcctg
gagctcttcattggcaaaatgcatgcaacatgctacgtgataccagttacaggtgccctc
gcggaagaagagcccacgccgtgtgcggtttcaggtcacggccgccattgtctgctcaat
ggtacgtcttgcagagagggctggcaaggccccaacaacggcatcaccaacttcgacaac
tttttgtttgccatgctcactgtgttccagtgcatcaccatggagggctggaccgacgtt
ctctactggatgaatgatgcaatgggctttgagctgccctgggtctactttgtcagtctg
gtcatctttggatccttctttgttctcaacttagttctgggtgtgttgagcggagagttt
tccaaagagcgagagaaggccaaggctcggggagatttccagaagctgcgtgagaagcaa
cagttagaggaagacctgaaaggctacctggactggatcacccaggctgaggacatcgac
cccgagaacgaggaggagggggacgaggagggcaagcgtaacccgagcatgcccagtgag
acagaatcggcaaacatagagaatcacaagggagaggaaaacaaatcgccctgctgtggg
ccgctatgtcaaaaaattactaagtcaaagttcagtcgtcagtggcgacggtggaaccgt
ttctgccgcagaaagtgtcgagcagccgtgaagtctgtgacgttttattggatggtcatc
atcctggtgttcctcaacacactcaccattgcctctgagcactacaaccagccggactgg
ctcaccgaagtacaggacgtagccaacaaagttctcctggcgatgttcaccttggagatg
ctagtgaagatgtacagtctggggctgcaggcgtacttcgtgtccttgtttaaccgcttt
gactgtttcgtggtgtgcggaggcatcgtagagaccatcctggtggagctggccatcatg
tctccgctgggcatctctgttttccgttgcgtacgactccttaggatcttcaaggttaca
cgtcattgggcgtccctcagtaacctcgtggcctctctgctcaactccatgaagtccatc
gcctccctgttgctgctgctcttccttttcatcatcattttctccctgctcggcatgcag
ctttttgggggcaagtttaattttgacgagactgtgaccaaaaggagcacgtttgataac
ttcccccaggccctgctcactgtgttccagattttgacaggagaagactggaacacggtg
atgtatgatggtatcatggcgtacggcggtccggcctcctctgggatggtggtctgcatt
tacttcatcatcctcttcatctgtggaaactacatcctgctaaacgtcttcttggccatt
gccgttgacaacctggcagacgcggagagcctcaacacagcacagaaggaggaagaggag
gccaagaagagaaagaatagtgccaaggatatgaacactgataagaagagagttgaaata
atggacgtcaaggatggagagatcaaggtgccagcagaggtcttgctggaggaagacaag
gagtcgtattctgccatcgactctccagcttgtgatgatgacgacgataacggcattctc
ccagacgtcccgccaggtccccgtcctcagaggctgtctgaactcaccatcaaagaaaag
actccgcccatcccgacgggcagcgcctttttcatcttcagcagcactaacccgtttcgt
gtgttctgccataagctgatcaaccatcagatcttcaccaacctaatcctggtcttcatc
atgctcagctccgtctctctggctgctgaggacccaatacgtaacttctctgctcgcaac
atcatacttggttattttgactatgctttcaccgcaatctttactgttgagatcctgttg
aagatcctaggctatgcagactatgtcttcactagtatgtttacatttgagatccttatt
aagatgacagcgtttggagcgttccttcacaaaggggcgttttgtagaaactacttcaac
ctattagacctgctggtcgttggtgtgtctctggtctcctttggcatccagtcctctgct
atttcagtggtgaagattctccgtgttttgagagtcctccgtccgctcagggccatcaac
agagccaagggactgaagcatgtggtccagtgtgtttttgtggccatcaggaccatcggc
aacatcatgattgtcaccacgctgctgcagttcatgttcgcttgtatcggagtgcagctc
ttcaaggggaaattttatcgctgcacagatgatgccaagtccagtccagaagactgcaag
ggtacctacattctctacaacaacggggacacggcgctacccatggtgaaggacaggatc
tggtacaacagcgacttcaactttgacaacgtcctcatggccatgatggctctttttact
gtctccacatttgaagggtggcccactctactctacaaggccatcgactctaacagagag
aacatgggtcccatctacaactaccgcatcgagatctccattttcttcatcatctacatc
atcatcatcgccttcttcatgatgaacatcttcgttggtttcgttatcgtgacctttcag
gagcagggcgagaaggagtacaagaactgcgagctggacaagaaccagcgtcagtgtgtg
gaatatgctcttaaagctcgtcctctgcggcgctacatccccaaaaacccttaccagtac
aagttctggtatgtggtcaactctactggctttgagtacgtcatgtttgtcctgatcatc
ctcaacaccttgtgtctggccattcagcaccacggtcagtctcatctgtttaactatgcc
atggacatcctcaacatggtcttcacgggtgttttcactgtggagatgatcctcaagctc
atcgccttcaaacccagaggctatgtcggggacgcctggaacgtcttcgatgccctggtc
gtgattggcagtgtagtcgacatcatactcagccagaactattttgctgatgcatggaac
acgtttgatgccttaattgttgtgggtagcgtggttgacattgccatcactgagatcaat
tcagcagccattcctgtcgtcaaggtgatagtggagccagggaacacagaggacagcgct
cgcatctccatcaccttcttccgcctgttcagagtgatgcgattggtcaaacttctgagc
aggggggagggcatcaggactctgctgtggaccttcatcaagtctttccaggctcttccc
tacgttgcactcctgatagcaatgctgttcttcatctatgctgtaattgggatgcaggtg
tttgggaaaatagccatggtggatggaacacaaatcaaccgtaacaacaactttcaaacc
tttcctcaagctgtcctgatgctcttcaggtgtgccacaggtgaggcctggcaggagatc
atgctggcatgtctgccagggaagttgtgcgactccgagtcggactacaaccccggagag
gagagaacttgcggcagtggcttcgccatcatctactttatcaccttctacatgctctgt
gctttcctgatcatcaacctgtttgttgctgtcatcatggataactttgactatctgacc
cgcgattggtccattcttgggccgcatcaccttgatgagtttaaaaggatctggtccgaa
tacgaccctgaagcaaagggccggataaagcacctcgatgtggtgactcttctgaggagg
atccagcctccactgggctttggcaagctctgccctcacagagtggcctgtaagcgtctg
gtagcgatgaacatgcccctcaacagcgatgggacagtcatgttcaatgccaccttgttt
gctctggtccgcaccgctctcaagattaagactgagggtaatctggagcaggccaatgag
gagcttagagctgtgattaagaagatctggaagaggaccagcatgaagctgctggaccaa
gtagtgccccctgcaggcgatgacgaggtaacagtggggaagttctatgccaccttcctg
atacaggactacttcaggaagttcaagaggcgcaaagagcaaggtcttgtaggaaggcgc
tcgtgggagaggctgaacacaaccatggctctacaggcaggcctgcggacgctgcatgac
attggaccagagatccgtcgagccatatcatgcgacctgcaggaggcggggctagtagag
gctaacggagaggaagaagaggaaatctacaggcgtaacggtggtctctttggtaaccat
gtcagtgctgatcagcaaggctactttcacccgaccactgtcacccaacggccgctacag
atccttcccttctcctctagtgcctcgaatgaacccacccaaacaggcaggacagccagc
gaggccgacggaggagaggagacggagatgaactcttcacccatccagtataaccatcac
tatcacacccctcatccacataactatcctcactgtgttcccgcttgccatcaatcgcca
ataccctccaatgccaacctcaacaatgccaacgtgccctcacttctctccatgaccaac
gggaggcagcagaagtgtttgttaaggggagaccgtccgtcctccaccaaaaatggctca
tcagcgtccactcacaggaaaggagtacacgacaggctttggaagtcgcactccacaagg
acacgctactatgaggcctacattaggtcagaaacgggcggtgggctttactccaccatt
cgtcgagaggagccggggggtggagacagcgatgatgagagaggctcgggagagtacttc
agcggggaggagtttcacgaagacggcatcatgctcacaaaggacaggttgtccaacaaa
gacgaccatgatgcagaggtagactttgaccttggggtttccaggagtgaccaaaagcct
gacggttactttgatgatgaccaacagccgatctaccaagatggcaggcggtcacccagg
aggtggcttttaccctcacctcaagcttccaacagaccaacattcagttttgagtgtctt
cgcagaagaagtagtcaggatgacgcccctctctctccatcctgcacagctcttccacta
cacctggtgcagcaacaggtgatggcggtggccggtttcgatgcgagcagaattcaccgt
ctgtctcctacacggtcactttgctcctgggtcacgccccctgcctcccccatcagccgc
gagtgcttaccatcctacacaccactgatacaggtggactggcgcagccccggcagcgtc
agcagcatccccggagcagtgaagaggagttcgtggtacacggacggccaggacagtcct
cacagccgcagccactctccgtcacttctgcagttacctgctgaatgctgctcacacaaa
ctgcagaagagaggcagcgccaacagtgtggtggaggctgtgttgatctctgagggtctg
gggaaatacgccagggaccccaagtttgtgtcagcgaccaaacacgtaatcgcagacgcc
tgcgagatgaccattgatgagatggagagtgccgccagtaacctgctgaacgggagtatg
gataacagcaacactgggggaactgggagcgtcggctcggacccaaatgccaccgagcat
ctcagagactgcagtatccgtgactacagcgacgaagagccgtacgtggctctgaaatgc
gaggaggacctagcagacgagatgatatgcatcacgtcgctatag

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