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KEGG   Aphelocoma coerulescens (scrub jay): 138113436
Entry
138113436         CDS       T10543                                 
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
  KO
K06238  collagen type VI alpha
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe04510  Focal adhesion
acoe04512  ECM-receptor interaction
acoe04820  Cytoskeleton in muscle cells
Brite
Exosome [BR:acoe04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   138113436 (COL6A2)
Glycosaminoglycan binding proteins [BR:acoe00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   138113436 (COL6A2)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   138113436 (COL6A2)
SSDB
Other DBs
NCBI-GeneID: 138113436
NCBI-ProteinID: XP_068877709
Position
7:complement(313347..337773)
AA seq 1020 aa
MFQQALFSTLLCVALVPLHAAQLDVDVADVSPTSCAEKRNCPINVYFIIDTSESVALQTV
PIQSLVDQIKRFIPMFIDKLESELYQNQVYITWQFGGLHYSDVVEIYSPLTSSKDIYLPR
LSAIQYLGRGTFTDCAISNMTQQIQTQMANGVNFAVVITDGHVTGSPCGGMKMQAERARD
MGIKLFAVAPSEKVYEQGLREIANLPHELYRNNYAITQRDTLEIDVNTIDRIIQAMKHEA
YGECYKMSCLEIAGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGV
PGLKGEKGEIGSDGRRGAPGLAGRNGTDGQKGRLGRIGPPGCKGDPGDKGPDGYPGDAGD
QGERGDAGIKGDPGRPGRSGPPGPPGEKGSPGLPGNPGAQGPAGAKGRKGEVGPPGPKGE
AGRRGDPGTKGSKGSPGGIGERGDPGPEGTRGLPGEVGNKGARGEQGLPGPRGPSGAVGE
PGRIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGRPGPKGGRGEL
GPKGAQGTKGEKGEPGDPGPGGEPGQRGPPGEAGPEGTPGPPGDPGLTDCDVMTYVRETC
GCCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSQTGARVGV
VQYSHEGTFEAIKLDDERINSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRRKK
AQVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQR
VQKMRLFSDLVAEEFIDKMEDVLCPDPQVVCPELPCQTELAVAQCTQRPVDIVFLLDGSE
RIGEQNFQSAHRFVEDVAQQLMLARSNSDHMNARIALLQYGSERDQNVVFPLTHNLTEIS
DALAQIRYLDSSSNIGSAIIHAINNIVLSPGNGQRLARRNAELSFVFITDGITGSKNLEE
AINSMKKQDVMPTVVALGSDVDMDVLLKLGLGDRAAIFREKDYNSLSQPSFFDRFIRWIC
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgttccaacaagccttgttttccactctcctttgtgtggctctagttcctctccacgct
gctcagcttgatgtggatgttgcagatgtcagtcctacctcttgtgcagaaaagaggaac
tgccccatcaatgtctacttcatcattgacacctcggagagcgtggctctgcagactgtg
cccatccagagcctcgtggaccaaataaagcggttcatccccatgttcatcgataaactg
gagagcgagctctaccagaaccaagtctacatcacctggcagttcggtgggctccattac
tcagacgtggtagaaatttacagccctttgacaagcagcaaagacatttacctgcccagg
ctgtccgccatccagtacctgggccggggcaccttcacggactgtgcgatctccaacatg
acccagcagatccagacccagatggccaacggcgtgaactttgcggtggtcatcaccgac
ggccacgtgacgggcagcccgtgcggggggatgaagatgcaggccgagagggcgcgagac
atgggcatcaagctgttcgcggtggcccccagcgagaaggtgtacgagcagggcctgcgg
gagatcgccaacctgccgcacgagctgtaccgcaacaactatgccatcacccagagggac
accctggagatcgacgtcaacaccatcgacaggatcatccaggctatgaaacacgaagcc
tacggtgagtgctacaagatgagctgcctggagattgcaggtccacctggtcccaaggga
taccgagggcagaagggtgcaaaggggaacatgggtgagccaggttcccctgggctgaag
ggacgacagggcgacccaggtattgaaggtccgatcggataccctggtcccaagggtgtc
ccagggctgaaaggagagaagggagaaattggatccgatggacggaggggtgcccctggc
ttggcaggaaggaacggcacagatggacagaagggcaggctggggagaattggaccacca
ggatgcaagggtgaccctggtgacaagggccctgatggctacccaggagatgcaggagac
caaggtgaaagaggagatgcaggcataaagggggatcctggccggcctggtcgcagtgga
cccccggggcccccaggagagaaaggaagcccgggactcccaggcaaccctggagctcaa
gggcctgctggagccaagggaaggaaaggtgaagtgggacctcctggacccaaaggagag
gccgggcgacgtggagatccagggacgaaaggcagcaaaggctctcctggaggcatagga
gaaaggggagatcctggtccagagggtactcgtggtctgcccggtgaggttggaaacaaa
ggagccaggggagaacaaggacttccaggaccccgaggcccttcgggtgctgtgggagag
ccaggcaggataggatcacgtggggatcctggtgacttgggcccaagaggtgatgctgga
ccaccaggaccaaagggtgacagaggcaggcctggcttcagctaccctggacccagagga
cctcagggtgacaagggtgagaaggggcggccaggacccaagggaggaagaggtgagctt
ggaccaaaaggagcacaagggaccaaaggagagaagggggagccgggtgatcctggccca
ggaggagagcctggacagcgtggtccacctggtgaagcaggccctgaggggacccctggc
ccaccaggagaccctggtctgactgactgtgacgtgatgacctacgtgcgagagacgtgt
ggatgctgtgactgtgagaagcgctgcggtgccctggacatcatgtttgtcatagacagc
tccgagagtatcggctacaccaacttcaccctggagaagaattttgtcgtcaacgtggtc
agcaggctgggctctattgccaaggaccccaagtcacagacaggtgcccgtgttggggtg
gtgcagtacagtcacgaggggacttttgaagccatcaagcttgatgacgagcgcatcaat
tccctgtcgagcttcaaggaagcagtgaagcgcctggagtggatcgctggaggcacctgg
acaccgtctgcccttcagtttgcctacaacaagctcatcaaggaaagcaggagaaagaaa
gcccaagtgttcgctgtggtgatcacagacgggcgctacgacccccgggatgatgacaag
aacctcggggctctctgcggtagagatgtggtggtcaacaccatcggcataggagacatg
ttcgaccagccggagcagagcgagaccctggtctccatcgcctgcaatgaaccccagcga
gtccagaagatgaggctcttctcagacctggtggcagaggaattcattgacaagatggag
gacgtgctctgcccagatccacaggtcgtctgccccgagctgccctgtcagacagagctc
gctgtggcccagtgcacccagcgccccgttgacatcgtcttcttgctggacggctcggaa
aggattggggagcagaacttccagagtgcccaccgcttcgtggaggatgtggcgcagcag
ctgatgctggcccggagcaacagcgaccacatgaacgcccggatcgcactgctgcagtat
ggcagcgagcgggaccagaacgtggtcttcccgctgacccacaacctgaccgagatctcc
gacgccctggcgcagatcaggtacctggactcgtcctccaacatcgggtcagccatcatc
cacgccatcaacaacatcgtgctcagcccgggcaacgggcagcgactcgcccggcgcaac
gccgagctctccttcgtcttcatcaccgacggcatcacgggaagcaagaacctggaggag
gccatcaactccatgaagaagcaggatgtcatgcccacggtggtggctctggggagtgac
gtggacatggatgtcctgctgaagcttggcctgggggaccgggcagccatcttccgggag
aaggactataacagcctctcccagcccagcttcttcgacaggttcattcgatggatttgt
taa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
All databases (6)   

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