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KEGG   Arvicola amphibius (Eurasian water vole): 119811701
Entry
119811701         CDS       T08327                                 
Symbol
Scn4a
Name
(RefSeq) sodium channel protein type 4 subunit alpha
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:aamp04040]
    119811701 (Scn4a)
Ion channels [BR:aamp04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   119811701 (Scn4a)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel GPHH IQ
Other DBs
NCBI-GeneID: 119811701
NCBI-ProteinID: XP_038181568
Position
4:15230171..15260801
AA seq 1846 aa
MASSSLPTLVPLGPHCLRPFTPESLAAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSIV
RRVAIKVLIHALFSMFIMITILTNCVFMTMSNPPSWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNDTNTTWYGNDMW
YSNDTWYGNDTWYGNDTWSSQESWASNYTFDWDAYINDEGNFYFLEGSNDALLCGNSSDA
GHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKHQEELEKAK
AAQALEGGEADGDPVYNKDCNGSLDTSGEKGPPRPSCSADSAISDAMEELEEAHQKCPPW
WYKCAHKVLIWNCCGPWVKFKHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFD
NVLSVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
ECVCKIASDCTLPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMV
IGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLHGK
ILSPKDIMLTLGEPGGAGETGESSPEDEKKEPPPEDENKELKDNHILNHVGRSDGPRPSI
ELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDIKKPPQPLYDGNSSVCST
ADYKPPEEDPEEQAEENPEGELPEECFTEACVQRCPCLYVDISQGRGKMWWTLRRACFKI
VEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVAY
GFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMR
VVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTSERFDISVVNNKS
ECESLMHTGQVRWMNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPDYEV
NIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPQNKIQGMVYDFVTKQVFDISIMILICLNMVTMMVETDDQSQLKVDILYN
INMVFIIIFTGECVLKMFALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLF
RVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYV
KKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTNIKGD
CGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLSEDDFEMFYETWEKF
DPDATQFIDYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEV
LGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRSV
KQASYMYRHSQDGNGDGAPEKEGLLANTMNKMYGPESENSVQGQGEEEKGSTGDAGPTME
LTPTNSLDTTQTPPSPPPSAPPQSALPPPSAPQGQTVRPGVKESLV
NT seq 5541 nt   +upstreamnt  +downstreamnt
atggccagctcatctctgcccaccctggtacccctgggtccccactgcctgcgccccttc
acccccgagtccctggcagctatagagcagcgggcagtggaggaggaggcccggctgcag
cggaataagcaaatggagatcgaggagcctgagcggaagccacgcagtgacctggaagcc
ggcaagaacctaccgctcatctacggggaccccccacctgaagtcatcggcatccccctg
gaggacctggacccttactacagtgacaagaagaccttcattgtgctcaacaaaggcaag
gccatcttccgcttctccgccacgcctgccctctacatgctgagccccttcagcatcgtc
aggcgtgtggccatcaaggtgctcatccatgcgctattcagcatgtttatcatgattacc
atcctgaccaactgtgtgttcatgaccatgagcaacccgccatcttggtccaaggacgtg
gagtacaccttcactgggatctacactttcgagtctcttattaagatgttggcccgaggc
ttctgcattgacgacttcacattcctccgggacccctggaactggctggactttagtgtc
atcacgatggcgtatgtgacagagtttgtggacttgggcaacatctcagccctgaggacc
ttccgtgtgctgcgggccctgaaaaccatcacggttatcccagggctgaagaccattgta
ggagccctgatccagtccgtgaaaaagctgtctgacgtcatgatcctcaccgtcttctgc
ctgagcgtctttgcgctggtggggctgcagctcttcatgggaaacctgcgtcagaagtgc
gtgcgctggcccccgcccatgaacgacaccaacaccacgtggtatggtaatgatatgtgg
tatagtaatgatacgtggtacggcaatgacacgtggtacggcaacgacacttggagcagc
caggagagctgggccagcaactacacctttgactgggatgcttacatcaacgatgaagga
aacttctacttcctggagggctccaatgatgccctgctctgtgggaatagcagtgatgcc
gggcactgccccgaaggttatgaatgcataaaggctggacggaaccctaactatggctac
accagctatgacaccttcagctgggccttcctagctctcttccgcctcatgacacaggac
tactgggagaaccttttccagctgacccttcgagcagctggcaagacctacatgatcttc
ttcgtggtcatcatcttcctgggttccttctacctcatcaatctgatcctggccgtggtg
gccatggcctatgctgagcagaatgaagctaccttggctgaggaccaggagaaagaggag
gagtttcaacagatgcttgagaaattcaaaaaacatcaggaggagttagaaaaggctaag
gctgcccaggctctggaaggtggggaggcagacggggacccagtctacaacaaagactgc
aatggcagcctggacacgtccggggagaaggggcccccaaggccgagctgcagcgcagac
agcgccatctcagatgctatggaggagctggaagaagcccaccagaagtgcccgccgtgg
tggtacaagtgtgcacacaaagtgctcatttggaactgctgtggcccgtgggtgaagttc
aagcatatcatccacctgatcgtcatggaccccttcgtggacctgggcatcaccatctgc
attgtgctcaacactctcttcatggccatggagcactaccccatgaccgagcactttgac
aatgtgctctccgtgggcaacttggtcttcacgggcattttcactgcagagatggtgctg
aagctgatcgccatggacccctatgagtatttccaacagggctggaacatcttcgacagc
ttcattgtcaccctcagcctggtggagctgggcctggccaacgtgcaggggctgtcggtg
ctgcgttccttccgtctgctgcgtgtcttcaagctggccaagtcatggccaacactcaac
atgctcatcaaaatcattggcaactcagtgggtgcgctgggcaacctgacactggtgctg
gccatcatcgtctttatcttcgccgtggtgggcatgcagctgtttggcaagagctataag
gaatgtgtgtgtaagatagcctcagactgcaccctcccccgctggcacatgaacgacttc
ttccactccttcctcattgtcttccgcatcctctgcggggagtggatcgagaccatgtgg
gattgcatggaagtggccggccaggccatgtgcctcaccgtcttcctcatggtcatggtc
attggcaacctggtggttctgaatctgttcctggctctcctgttgagctccttcagcgcc
gacagcctggcagcgtcagatgaagacggcgagatgaacaacctgcagattgccatcgga
cgcattaagtggggcatcggctttgccaaagccttcctcctggggctgctgcacggcaag
atcctgagccccaaggacataatgctcaccctcggtgagcccgggggtgctggggagacg
ggggagagctctcctgaggatgaaaagaaggaaccgcccccagaagatgagaacaaggaa
ctgaaggataatcatatcctgaaccacgtgggccggagcgatggcccccgccccagcatc
gagctggaccacctcaactttatcaacaacccctacctcaccatccaggtgcccattgcc
tctgaggagtccgacctggagatgcccacagaggaggagactgacacattctcggagcct
gaagacattaagaagccaccacagcccctctacgatgggaactcctccgtctgcagcacg
gctgactacaagccccctgaagaggaccctgaggagcaggctgaggagaaccctgagggg
gagctgcctgaggaatgcttcactgaagcctgcgtgcaacgctgcccctgcctctatgtg
gacatctcccagggccgtgggaaaatgtggtggacgctgcgcagggcctgcttcaagatt
gtcgagcacaactggtttgagaccttcattgtcttcatgatcttgctcagcagtggagcc
ctggccttcgaagacatatacattgagcagcggcgagtcattcggactatcctggaatac
gctgacaaggtcttcacttacatcttcatcctggagatgctgctcaagtgggtggcctac
ggcttcaaggtgtatttcaccaacgcctggtgttggctcgatttcctcatcgtggatgtc
tccattatcagcctggtggccaactggctgggctactctgagctggggcccatcaaatcc
ctgcgtacactgcgggccttgcgtcccctgagggcactctctcgatttgagggcatgagg
gtggtggtgaacgcccttctgggagccatcccctccatcatgaatgtgctcctcgtgtgc
ctcatcttctggcttatcttcagcatcatgggggtcaacttgtttgctgggaagttctac
tactgtgtcaacaccaccacctccgagaggttcgatatctctgtggtcaacaataagtcc
gagtgtgaaagcctcatgcacacgggccaggtccgatggatgaacgttaaggtcaactat
gacaacgtgggtctgggctatctctccctccttcaggtggccactttcaagggttggatg
gatatcatgtatgcggctgtggactcccgggagaaggaggagcagccagactatgaggtg
aacatctacatgtacctttacttcgtcatcttcatcatctttggctccttcttcacgctc
aacctcttcattggggtcatcattgacaacttcaaccaacagaagaaaaagtttggaggg
aaagacatcttcatgacagaggagcagaagaaatattacaacgccatgaagaagctgggc
tccaagaagccccagaaacccatcccccgccctcagaacaagatccagggcatggtgtat
gacttcgtgacgaagcaggtgtttgacatctccatcatgatcctcatctgcctcaacatg
gttaccatgatggtggagacggacgaccagagccagctcaaggtggacatcctgtacaac
atcaacatggtgttcatcatcatcttcacaggggagtgtgtgctcaagatgtttgccctg
cgccattactacttcaccattggctggaacatcttcgacttcgtggttgtcatcttgtcc
attgtgggcctcgcgctttctgacttgatacagaaatatttcgtctcacccacattgttc
cgtgtgatccgcttggcacggatcgggcgtgtcttgcgtctgatccgtggggccaagggc
atccggacgctgttgttcgccctcatgatgtcactgcctgccctcttcaacatcggcctc
cttctctttctggttatgttcatctactccatctttggcatgtccaacttcgcctatgtc
aagaaagaatcaggcatcgatgacatgtttaactttgagacctttggcaacagcatcatc
tgcctcttcgagatcaccacgtcagctggctgggatgggcttctgaaccccatcctcaac
agtgggcccccagattgtgacccgacattggagaacccaggcaccaacatcaagggtgac
tgtggcaacccatccatcggcatctgtttcttctgcagctacatcatcatctccttcctc
atcgtggtcaacatgtacatcgccatcatcctagagaatttcaacgtggccactgaggag
agcagcgagcccctcagtgaggacgactttgagatgttctatgagacctgggaaaagttt
gaccctgacgccactcagttcatcgattacagccgcctctccgactttgtggacaccctg
caggagccgctgagaatcgccaagcccaacaagatcaagctgatcacgttagacctgccc
atggtgccgggggacaagatccactgcctggacatcctctttgccctgaccaaagaggta
ctgggggactccggggagatggatgccctcaaacagaccatggaggaaaagttcatggca
gccaacccctccaaggtctcctacgagcccatcaccaccaccctcaagaggaagcaggag
gaggtgtgtgccatcaaaatccagagggcctaccgccgccacttgctgcagcgctctgtg
aagcaggcctcctacatgtaccgccacagccaggatggcaatggagacggggctcccgag
aaggagggattgcttgccaacaccatgaacaagatgtatggccctgagagtgagaacagt
gtgcagggccagggagaggaggagaagggttctacaggggatgctggacccaccatggag
ctcacacccaccaactccttggacaccacccagactcctccttctcctcctccatcagca
ccaccgcaatcagcactaccaccgccatcagcaccacaggggcagactgtgcggccaggg
gtcaaagagtctctcgtctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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