[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Amaranthus tricolor (tampala): 130827186
Entry
130827186         CDS       T09367                                 
Name
(RefSeq) syntaxin-42-like
  KO
K08489  syntaxin 16
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    130827186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atri04131]
    130827186
Membrane trafficking [BR:atri04131]
 SNARE
  Syntaxin (Qa)
   Stx-TGN / EE
    130827186
SSDB
Motif
Pfam: SNARE Prominin
Other DBs
NCBI-GeneID: 130827186
NCBI-ProteinID: XP_057548823
Position
11:23416388..23425559
AA seq 324 aa
MATRNRTILFRKHRDAIKAVRTPDSSLMTGGHRGGVGGPVIEMTSLLNSNASSSSYTPLS
TNDPSTSRDALTDGLPPAWVDIAEEITANIQRARIKMAELVKAHSKALMPSFGDGRDDQR
RIEGLTLEITDILRRSEKRLKDLSLRGPSEDSGVRKNVQRSLATDLQNLSVELRKKQSTY
LKRLRQQKEGSDDIDVEMNLNGSMSKVENEYSDVGFDNYQVAEFKKSEHLTAEREREINQ
VVQSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVAASVEEGFKQLQKAERSQRQGGMV
RCATILIVMCFVMLVLLILKEILF
NT seq 975 nt   +upstreamnt  +downstreamnt
atggcgactagaaatcgtacaatactgttccgaaagcatagagatgcaatcaaagcagtt
cgaactccagattcatcgttaatgactggtggacacagaggtggagttggcggtcccgtc
attgaaatgacttcactccttaattctaacgcatcttcttcttcctatactcctctcagc
accaacgatccctctacatccagggatgcattgacagatggcctaccaccagcatgggtg
gacattgcagaagaaataacagcaaatatacagcgtgctcgaatcaaaatggcagagctg
gtgaaggctcattcaaaggctttaatgccatcctttggggatgggagagatgatcagcgt
cggattgagggtcttaccctagagattactgatatattgaggagatcagagaaaaggttg
aaagatctgtcactacgtggtccttcagaggattctggtgttcgtaaaaatgtacagcgt
tcccttgctacagatcttcagaacctttctgtagaacttcgtaagaaacagtcaacatat
ctaaaacggcttaggcaacagaaggaggggtctgatgacattgacgtggaaatgaattta
aatggaagcatgtcaaaagttgagaacgaatatagcgacgtgggttttgacaattatcaa
gtggctgagttcaagaaaagtgaacatttaacagcagaaagagagagagagattaaccag
gttgtgcagtctgtgaatgaacttgctcagatcatgaaagatctatcagttcttgtgatt
gaccagggcaccatagttgatcggatagactacaacatccagaacgttgctgcatcagtt
gaagagggctttaaacagcttcagaaagctgagagatcgcaaaggcaaggaggcatggta
cggtgtgcaacaattctcatcgtgatgtgctttgttatgttggtgcttctcatcctcaag
gagatactattctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system