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KEGG   Orcinus orca (killer whale): 101270600
Entry
101270600         CDS       T05247                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X4
  KO
K08524  retinoid X receptor alpha
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03320  PPAR signaling pathway
oor04148  Efferocytosis
oor04151  PI3K-Akt signaling pathway
oor04659  Th17 cell differentiation
oor04919  Thyroid hormone signaling pathway
oor04920  Adipocytokine signaling pathway
oor04928  Parathyroid hormone synthesis, secretion and action
oor04932  Non-alcoholic fatty liver disease
oor04976  Bile secretion
oor05160  Hepatitis C
oor05200  Pathways in cancer
oor05202  Transcriptional misregulation in cancer
oor05207  Chemical carcinogenesis - receptor activation
oor05216  Thyroid cancer
oor05222  Small cell lung cancer
oor05223  Non-small cell lung cancer
oor05226  Gastric cancer
oor05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:oor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    101270600 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    101270600 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    101270600 (RXRA)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    101270600 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    101270600 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    101270600 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101270600 (RXRA)
   05202 Transcriptional misregulation in cancer
    101270600 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    101270600 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    101270600 (RXRA)
   05216 Thyroid cancer
    101270600 (RXRA)
   05222 Small cell lung cancer
    101270600 (RXRA)
   05223 Non-small cell lung cancer
    101270600 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    101270600 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    101270600 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    101270600 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oor03000]
    101270600 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:oor03310]
    101270600 (RXRA)
Transcription factors [BR:oor03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    101270600 (RXRA)
Nuclear receptors [BR:oor03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   101270600 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 101270600
NCBI-ProteinID: XP_033271049
Position
6:complement(118074464..118171621)
AA seq 495 aa
MDTKHFLPLDFSTQVNSSSLNSPTGRGSMAAPSLHPSLGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSPMNPISSSEDIKPPLGLNG
VLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREACGRAARALAAEGLPRELRADWKPPRASAVQE
ERQRGKDRAENEVESTSSANEDMPVEKILEAELAVEPKTETYVEANVGLNPSSPNDPVTN
ICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA
TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPA
EVETLREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI
DTFLMEMLEAPHQMT
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggacaccaaacatttcctgccgctcgacttctccacgcaggtgaactcctcttccctc
aactcccccacggggcgcggctccatggccgccccctcgctgcacccctccctggggccc
ggcatcggctcctcgctcggctccccgggacagctgcactcgcccatcagcaccctgagc
tcccccatcaacggcatgggtccgcccttctcggtcatcagctcccccatgggcccccac
tccatgtccgtgcccaccacacccaccctgggcttcggcaccggcagcccccagctcaac
tcgcccatgaaccccatcagcagcagcgaggacatcaagcccccgctgggcctcaacggc
gtcctcaaagtcccggcccacccctcggggaacatggcgtccttcaccaagcacatctgt
gctatctgcggggaccgctcctcaggcaagcactatggggtgtacagctgcgagggctgc
aagggcttcttcaagcggacggtgcgcaaggacctgacctacacctgccgggacaacaaa
gactgcctgattgacaagcggcagcggaaccggtgccagtactgccgctaccagaagtgc
ctggccatgggcatgaaacgcgaagcttgtgggcgcgctgctcgggccctggcggcggag
gggctgccgcgggagctgcgggctgactggaagcctccccgtgcctcagctgtgcaggag
gagcggcagcggggcaaggaccgggctgagaacgaggtggagtctacaagcagcgccaac
gaggacatgcccgtggagaagatcctggaggccgagctggctgtcgagcccaagaccgag
acgtacgtggaggcaaacgtggggctgaaccccagctcgcccaatgaccccgtcaccaac
atctgccaggcggccgacaagcagctcttcaccctggtggagtgggccaagcggatccca
cacttctccgagctgcccctggacgaccaggtcatcctgctgcgggcaggctggaacgag
ctgctcatcgcctccttctcccaccgctccatagccgtgaaggacggcatcctcctggcc
accgggctgcacgtccaccgcaatagcgcccatagcgcgggggtgggcgccatctttgac
agggtgctgacggagctggtgtccaagatgcgggacatgcagatggacaagacggagctg
ggctgcctgcgcgccatcgtcctcttcaaccccgactccaaggggctctcgaacccggcc
gaggtggagacgcttcgcgagaaggtctacgcgtccctggaggcgtactgcaaacacaag
taccccgagcagccaggaaggtttgcaaagctgctacttcgtctgccggccctgcgctcc
atcggcctcaagtgcctggaacacctcttcttcttcaaactcatcggggacacgcccatc
gacaccttcctcatggagatgctggaagccccgcaccaaatgacttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (52)   

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