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KEGG   Oncorhynchus mykiss (rainbow trout): 110538038
Entry
110538038         CDS       T07259                                 
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:omy04040]
    110538038 (scn4ab)
Ion channels [BR:omy04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   110538038 (scn4ab)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C GPHH PKD_channel
Other DBs
NCBI-GeneID: 110538038
NCBI-ProteinID: XP_021480266
Ensembl: ENSOMYG00000041650
Position
12:65460530..65496809
AA seq 1854 aa
MPTRKITLLEAWERNRTFRRKKAKDLKICPRLLPLLRDPGVVASLTQQNAKMVALLPPTG
TEVFRHFTLESLVEIDRRMAEEAKEQERQKTLNIEVAEQDLPKPAVDLETGKILPFIYGD
PPCELFNTPLEELDPFYKSHKTFIVITKRNTIFRFNAEPACYILTPFSILRRGSIKILMH
SLFSMFIMLTVVFNCAFMTISDPPASSKTVEYVFTGIYTFEATIKVFSSGFCVGDFTYFR
DPWNWLDFILISMTYLTEFVDLGNVSVFRMFHVLRALKIITVIPGLKTIVGTLIMSVKKL
ADVMIITVFCLAVFAMIGLQMFMGNLKQKCVDWPPGEWHFNSTYMGNINMANGFNDVMGY
NDTNTGNSTWDLKAYINDKANHYFLPGMLDPLLCGNASDAGICPEGYTCMKAGGNPNYGY
TSYDNFGWAYLALIQLMTQDFWENLLQLTLRSAGKTYMIFFVVVIFLCSFYLINLILAVV
AIAHAEQNEATRAEAKEKEAEYAMIMVQLKERREAEVKERASRPKRSKDQLEVAGLQKKT
PSSPSVYSQDAMDDLEGELRPCPPCWYKCSDVFLKWNCCVPWVTFKKWVYFIVMDPFMDL
VITICIVLNIMFLAMEHYPMTIEFEEVLSVGNLVFIGIFTAEMVLKLIAMDPYYYFQVGG
NIFDSIIVAISLMELWLADVEGLSVLRSFRLMRVFKQTKSWPTLNMTIKIIGNSVGTLVN
ITLVLAIIVFMFAAGGMHLFGKSYKECVCKISLDCELPRWHMENFFHAFLTIFRVLCGEW
IETMWECMEVAGQGICLVFFMMVMVIGKLVVLNLFLTFLLSSFSRYNLAAPEEDGEMNNL
QIATSRITRGMNWAKAYVIKQFCIIIGNQTKEDGDGADGNGGSNGDVDGLPKDSLALKNI
NSSDNTKADLELKMLDHVNPSGFLAHANLTLDVPIAKMESDDDEDDSSEVKGEGRNEDAK
RRKPIAQDNASLICRTSVEVEKEEANPTSPENCWTESCIGRCPCLDCDITTGKGKTWWNF
RKTCFLIVEHNYFQSFIIFMILMSSGALAFEDIHIEQRRTIKVILEYADQVFTYVFIIEM
LLKWVAYGFQAYFTNAWCWLDFLIVNVSVISLTANILGYAELGSIKSLRKLRALRPLRAL
SRFEGMKVVVNALVGAIPSIVNVLLVCVTFWLIFSIIGVNLFAGKYYYCFNTTSEEMFSA
DIVNNMTECIQLTEGNADVRWMNSKINFDNVAMGYLSLLQVATFKGWLGIMYGAVDSRTV
GEQPMYEDNVYMYIYFVMFIIFGTFVMLNLFIGVIIDNFNQQKKKFGGKNIFMTEEQNKY
YNAMKKLGSKKLQKPIPRPKNKFAGIVYDLITNQFFEVFIIVLICLSMVTMMVDTDDQSE
EKDSILFFINLVFIFIFVAECILKLIGLRQYYFTVGWNILDFVVVILSILGLLLADLIEK
YFVSPTLFRVVRLARIGRVLRLIRGAKGIRTLLFSLRMSLPAIFNIGLLLLLIMFIFSIF
GMSNFAYVKKEAGIDDMINFETFGNSIICLFTITTLAGWDSVLSPMMSSTPPNCDPYIEN
PGTDVRGNCSSLGWGILFICSYIIMCFFLVVNMYIAVILENFNVVIEESGNPLCEEDFEM
FYETWEKFDPDASQFVAYDILSEFCDTLKDPLRIPKPNAIKLITMDLPIVPGDKIHCLDI
LLALTTEVLGESGEMDAMKESMEEKFMAKNPFKVSFKPITTTLRRKQEEVAAVVIQRAYC
KHLLRSSMKLASYKYHEKKELTKEDEAPPEQEGMIAIRMSKLYESQQSLGVDETVVDMDS
YVKRERKELTATQLPVVTTETPPPVELQNEIISHSAPFVIPASTHNSQLKESHV
NT seq 5565 nt   +upstreamnt  +downstreamnt
atgccgacccgaaagataacactgctggaagcctgggagagaaacaggacctttcggagg
aagaaagctaaagacctgaaaatatgtcctcgtctactcccactgctgagagaccccggt
gtggttgcatccctcacccagcagaatgccaagatggtcgccctgctccctcccacaggc
accgaagtgttccgccacttcacccttgagtcgctggtggagattgataggcggatggcc
gaggaagcaaaggagcaggagagacaaaagaccctgaacattgaggtggcagagcaggac
ctgccaaagccagccgtcgacctggagaccggcaagatcctgccgttcatctacggagac
ccaccatgtgagctgttcaacacacccctggaggaactggatcctttctacaaatcacac
aaaacctttattgtcatcaccaaaaggaatacaatcttcagattcaatgctgagcctgcc
tgctacattctgactcccttcagtattctcaggagaggatccatcaaaattctcatgcat
tcattgtttagcatgttcatcatgttgacagtcgtgttcaactgtgcgtttatgacgatc
agtgaccctccggcatcgagtaaaactgttgaatatgttttcactggtatctataccttt
gaggcaacaattaaagtgttttccagtggcttctgtgttggagatttcacatactttcga
gatccatggaactggctggatttcattttgatcagcatgacgtacctcacagagtttgtt
gacctgggcaacgtgtctgtcttcaggatgttccatgtactccgagcccttaaaataatc
actgtaattcccggtctgaaaaccattgtgggcactctgatcatgtcagtgaagaagctg
gctgatgtgatgatcataacagtgttctgcctggctgtgttcgctatgatcggcctgcaa
atgttcatgggaaacctgaagcagaagtgtgttgactggccccctggtgaatggcatttc
aactccacctacatgggcaacatcaatatggctaatggttttaatgacgttatgggctac
aatgacacgaacaccggcaacagcacatgggacttgaaggcatacatcaacgataaagca
aaccattacttccttcctggaatgttagaccctcttctttgtggaaacgcttctgatgct
ggaatatgtcctgaaggatacacgtgtatgaaggccggagggaatcccaactatggatac
acaagctacgacaattttggatgggcctaccttgccctaattcagctcatgacacaggac
ttctgggaaaatctactccagctgactcttcgctcagcagggaaaacctacatgattttc
tttgtggtggtgatcttcctgtgctcgttctacctgatcaacctgatcctagctgtggtg
gccatagcgcatgctgagcagaacgaggccaccagggccgaggccaaggagaaggaggcg
gagtatgccatgatcatggtgcagctgaaggaaaggagagaagcggaggtcaaagagagg
gccagtagacccaagcggagtaaggaccagctggaagtagcaggccttcagaagaagaca
cccagttcacccagtgtctacagccaagatgccatggacgatttggagggggaactgagg
ccttgtcctccttgctggtacaagtgttcagatgtcttcctgaaatggaactgctgtgtg
ccctgggtgactttcaagaagtgggtgtacttcatagtgatggacccattcatggacttg
gtcatcaccatctgcattgtactcaacatcatgttcttggccatggagcactaccccatg
acaatagagtttgaagaagtgctgagtgtggggaacttggtcttcataggaatcttcaca
gcagagatggtgctgaagctcatcgccatggatccgtactactacttccaggtcgggggg
aacatcttcgacagcatcattgtggcaatcagcctgatggagctgtggctggccgacgtc
gagggtctttccgtgcttcgctccttccgtctgatgcgcgttttcaagcagaccaaatcc
tggcccacactcaacatgacaatcaagatcatcggtaattcagtgggcaccctggttaac
atcactctggttctggccatcatcgtcttcatgtttgccgcggggggcatgcatctcttc
ggcaagagctacaaagagtgtgtctgcaagatctccttggactgcgagctgccccgctgg
cacatggaaaacttcttccacgcttttctcaccatcttccgagtgctgtgcggagagtgg
atcgagaccatgtgggaatgcatggaggtggccggacagggcatttgtctcgtcttcttc
atgatggtcatggtcatcggtaaactagtggtgttgaacctcttcttgacctttctgctg
agctcgttcagccgttacaacctggcggctccagaggaggacggggagatgaacaacctg
cagatcgccaccagcaggattaccaggggcatgaactgggccaaggcatacgtcatcaag
cagttctgcattatcataggcaaccagactaaggaggatggagacggggctgacggtaat
gggggtagtaatggggatgtggacggcctcccaaaggacagcttggctttgaaaaatatc
aattccagtgacaacacaaaggctgatttggagctcaaaatgctggaccatgtaaaccca
agtggatttcttgcacatgcgaatttgaccctggatgtacccattgccaaaatggagtct
gatgatgatgaggatgacagttctgaagtgaaaggagaaggcagaaatgaggatgctaag
cgaaggaaacctattgcacaggacaatgcctctttgatctgcaggacaagtgtggaagtg
gagaaagaagaggcaaaccccaccagccctgagaactgctggactgagtcatgtattgga
cgatgcccttgccttgattgtgacatcaccacagggaaaggaaaaacttggtggaacttc
aggaagacatgcttcctcattgtggagcacaactactttcagtcctttatcatcttcatg
atcctgatgagtagtggagctttggcttttgaagacatacacattgaacagcgcaggacc
ataaaagtcatcctggaatatgctgatcaagtcttcacctacgtgttcattattgagatg
ctcttgaagtgggtggcttacggattccaggcctacttcacaaacgcatggtgctggctg
gacttcctcattgtgaatgtgtctgtgattagtttaacggctaacatcctgggctacgct
gaacttgggtcaatcaaatctcttcgaaagttacgggctttgcggcccctccgcgccctg
tccagatttgagggaatgaaggtggtggtgaacgctctggtgggggccattccttccatt
gtcaatgtgcttctagtgtgcgtcaccttctggctcatcttcagcatcattggagtcaac
ctgtttgctgggaagtactactactgcttcaataccacgtctgaggagatgttctctgct
gacattgtgaacaacatgaccgaatgcatccaactaacagagggtaatgccgacgtgcgc
tggatgaactcaaagatcaactttgacaacgtggccatgggctacctttccctcctgcaa
gtagcaacatttaaaggatggctgggtataatgtatggcgctgtggattcacgtactgtg
ggagagcaacccatgtatgaggataatgtttacatgtacatctactttgtcatgttcatc
atctttgggaccttcgtcatgctgaatctcttcattggtgtcattatcgacaacttcaac
cagcaaaaaaagaagtttggagggaaaaacattttcatgacagaggaacagaataaatac
tacaatgccatgaaaaagcttggttccaagaagctacagaaacccattcctagacccaag
aacaaattcgcaggcattgtttatgacctgatcaccaaccaattcttcgaggtcttcatt
attgtgctgatctgcctcagcatggtaacgatgatggtggacacggatgaccagagcgag
gagaaggatagcatcctcttcttcatcaacctggtgtttatcttcatcttcgtcgcagag
tgtatcctcaagttgatcggattgcggcaatattattttaccgtcggatggaatatttta
gattttgtcgtcgtcattctctccatccttggtttactgctggcggacctcatagagaag
tattttgtctcacctacccttttccgtgtcgtaagactggccaggattggtcgagttctg
agacttatccgaggagctaaaggcatccggacactgttgttttccctgaggatgtcactt
ccagctatcttcaacattgggctcctgctccttctcatcatgtttatcttctccattttt
ggaatgtccaactttgcatatgtcaaaaaggaggccggaatagacgatatgatcaatttt
gaaacttttggcaacagtataatttgtctgttcacgatcacaaccttagccggttgggac
agtgtcctctcacccatgatgagtagtacacctccgaactgtgacccgtacattgaaaat
ccaggcacagatgtaagaggcaactgcagcagccttggttggggaattctttttatctgc
agctacatcatcatgtgtttctttcttgtggtcaacatgtacattgccgttattctcgag
aacttcaatgttgtcatcgaggagagcggcaacccgctgtgtgaggaagactttgagatg
ttctatgagacctgggagaagttcgaccctgacgcgtcacaattcgtcgcctacgacatt
ttgtcggagttctgtgacacgcttaaagacccgctcaggatccccaaacccaacgcaatc
aagctgatcaccatggaccttcccattgtccctggggataagatccactgtctggacatc
ctgctggcgctgaccacagaggtgctgggagaatcaggggagatggatgccatgaaggag
agcatggaggagaagttcatggccaaaaacccctttaaagtgtcattcaagccaatcacc
accaccctgaggcgaaagcaggaggaggtagcagctgttgtcattcagagagcctattgt
aagcatctgctgagaagttcgatgaaactcgcttcctacaagtaccatgagaagaaagag
ttaaccaaggaggacgaagcgccgccagagcaggaaggaatgattgccatcagaatgagc
aaactgtatgaaagccaacaatcgctcggagtggatgaaaccgttgtagatatggattct
tatgtaaaacgggagagaaaagaactgacagcgacacaacttcctgtggtgactactgaa
acgccgccgcctgtggagcttcagaacgagatcatctcgcactctgccccctttgtcatc
ccggcctcaacccataactcacagctgaaagagtcccatgtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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