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KEGG   Oncorhynchus kisutch (coho salmon): 109893212
Entry
109893212         CDS       T09179                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha B
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:oki04040]
    109893212
Ion channels [BR:oki04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   109893212
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C GPHH
Other DBs
NCBI-GeneID: 109893212
NCBI-ProteinID: XP_020341915
Ensembl: ENSOKIG00005012123
Position
LG6:65460693..65501917
AA seq 1854 aa
MPTRKITLLEAWERNRTFRRKKAKDLKICPRLLPLLRDPSVVASLTQQNAKMVALLPPTG
TDVFRHFTLESLVEIDRRMAEEAKEQGRQKTLNFEVAKQDLPKPAVDLETGKILPFIYGD
PPCELFNTPLEELDPFYKSHKTFIVITKRNTIFRFNAEPACYILTPFSILRRGSIKMLMH
SLFSMFIMLTVLSNCAFMTMSVPPAWSKTVGYVFTGIYTFEATIKVLSSGFCVGDFTYLR
DPWNWLDFILISMTYLTEFVDLGNVPVFRMFRVLRALKLITVIPGLKTIVGTLIMSVKKL
ADVMIITVFCLAVFAMIGLQMFMGILKQKCVHWPPGEWHFNSTYMGNITMANGFNDVMGY
NDMNTGNSTWDFKAYINDKANHYFLPGMLDPLLCGNVSDAGICPEGYTCMKAGGNPNYGY
TSYDNFGWAYLALIQLMTQDFWENLLQLTLRSAGKTYMIFFVVVIFLCSFYLINLILAVV
AIAHAEQNEATRAEAKEKEEEYAMIMVQLKERREAEVKERASRPKGSKDQLEVAGLQKKT
PSSPSVYSQDAMDDLEEELRPCPPCWYKCSDVFLKWNCCVPWVTFKKWVHFIVMDPFMDL
VITICIVLNIMFLAMEHYPMSIGFEEVLSVGNLVFIGIFTAEMVLKLIAMDPYYYFQVGG
NIFDSIIVAISLMELWLADVEGLSVLRSFRLMRVFKQAKSWPTLSMTIKIIGNSVGTLVN
ITLVLAIIIFMFAVGGMQLFGKSYKECVCKISLDCMLPRWHMDDFFHALLIIFRALCGEW
IETMWDCMEVAGQGICLVFFMMVMVIGKLVVLNLFLTFLLSSFSRYNLAAPEEDGEMNNL
QIATSRITRGMDWAKAYIIKQFCIIIGNQPKEDGDGADGNGGSNGDVDGLPKDSLALKNI
NSSDNPKADLELKMLDDVNPSGFLANANLTLNVPIAKMESDDDEDDSSDVKGKGTNEDAK
RRKPIAQDNASLICRTSVEVEKEEANPTSPENCWTATCIGRCPCLDCDITTGKGKTWWNF
RKTCFLIVEHNYFQSFIIFMILMSSGALAFEDIHIEQRRTIKVILEYADQVFTYVFIIEM
LLKWVAYGFQAYFTNAWCWLDFLIVNVSMIGLTANILGYAELGSIKSLRKLRALRPLRAL
SRFEGMKVVVNALVGAIPSLVNVLLVCVTFWLIFSIIGVNLFAGKYYYCFNTTSEEMFSA
DIVNNRSECVQLIEGNADVRWMNSKINFDNVAIGYLSLLQVATFKGWLGILYGAVDSRMV
GEQPMYEDNVYMSIYFVMFIIFGTFVMLNLFIGVIIDNFNQQKKKFGGKNIFMTEEQNKY
YNAMKKLGSKKLQKPIPRPKNKFAGIIYDLITQQFFEVFIIVLICLSMVTMMVDTDDQSE
EKDSILFFINLVFIFIFIAECILKLIGLRQYYFTVGWNILDFVVVILSILGLLLADLIEK
YFVSPTLFRVVRLARIGRVLRLIRGAQGIRTLLFSLRMSLPAIFNIGLLFFLIMFIFSIF
GMSNFAYVKKESGIDDMINFETFGNSIICLFMITTLAGWDSVLSPMMSSTPPNCDPYIEN
PGTNVRGNCSSPGWGILFICSYIIMCFFLVVNMYIAVILENFNVVIEESGNPLCEEDFEM
FYETWEKFDPDASQFIAYNILSEFCDTLKDPLRIPKPNAIKLITMDLPIVPGDKIHCLDI
LLALTTEVLGESGEMDAMKESMEEKFMAKKPFKVSFKPITTTLRRKQEEVAAVVIQRAYC
KHLLRSSMKLASHKYHEKKELTKEDEAPPEQEGMIAIRMSKLYESQQSLGVDETVVDMDS
YVKLERKELTATQPPVVTTETPPHVELQNEIISHSAPFVIPASTHNSQLKESHV
NT seq 5565 nt   +upstreamnt  +downstreamnt
atgccgacccgaaagataactctgctggaagcctgggagagaaacaggacctttcggagg
aagaaagctaaagacctgaaaatatgtcctcgtctactcccactgctgagagaccccagt
gtggttgcatccctcacccagcagaatgccaagatggtcgccctgctccctcccacaggc
accgatgtgttccgccacttcacccttgagtcgctggtggagattgataggcggatggcc
gaggaagcaaaggagcaggggagacaaaagaccctgaactttgaggtggcaaagcaggac
ctgccaaagccagccgtcgacctggagaccggcaagatcctgccgttcatctacggagac
ccaccatgtgagctgttcaacacacccctggaggaactggatcctttctacaaatcacac
aaaacctttattgtcatcaccaaaaggaatacaatcttcagattcaatgctgagcctgcc
tgctacattctgactcccttcagtattctcaggagaggatccatcaaaatgctcatgcat
tcattgtttagcatgttcatcatgttgacagtcctgtccaactgtgcgtttatgacgatg
agtgtccctccggcatggagtaaaactgttggatatgttttcactggtatctataccttt
gaggcaacaattaaagtgttgtccagtggcttctgtgttggagatttcacataccttcga
gatccatggaactggctggatttcattttgatcagcatgacgtacctcacagagtttgtt
gacctgggcaacgtgcctgtcttcaggatgttccgtgtactccgagcccttaaactaatc
actgtaattcccggtctgaaaaccattgtgggcactctgatcatgtcagtgaagaagctg
gctgatgtgatgatcataacagtgttctgcctggctgtgttcgctatgatcggcctgcaa
atgttcatgggaatcctgaagcagaagtgtgttcactggccccctggtgaatggcatttc
aactccacctacatgggcaacatcactatggctaatggttttaatgatgttatgggctac
aatgacatgaacaccggcaacagcacatgggacttcaaggcatacatcaacgataaagca
aaccattacttccttcctggaatgttagaccctcttctttgtggaaacgtttctgatgct
ggaatatgtcctgaaggatacacgtgtatgaaggccggagggaatcccaactatggatac
acaagctacgacaattttggatgggcctaccttgccctaattcagctcatgacacaggac
ttctgggaaaatctactccagctgactcttcgctctgcagggaaaacctacatgattttc
tttgtggtggtgatcttcctgtgctcgttctacctgatcaacctgatcctagctgtggtg
gccatagcgcatgctgagcagaacgaggccaccagggccgaggccaaggagaaggaggag
gagtatgccatgatcatggtgcagctgaaggaaaggagagaagcggaggtcaaagagagg
gccagtagacccaaggggagtaaggaccagctggaagtagcaggccttcagaagaagaca
cccagttcacccagtgtctacagccaagatgccatggacgatttggaggaggaactgagg
ccttgtcctccttgctggtacaagtgttcagacgtcttcctgaaatggaactgctgtgtg
ccctgggtgactttcaagaagtgggtgcacttcatagtgatggacccattcatggacttg
gtcatcaccatctgcattgtactcaacatcatgttcttggccatggagcactaccccatg
tcaataggttttgaagaagtgctgagtgtggggaacttggtcttcataggaatcttcaca
gcagagatggtgctgaagctcatcgccatggatccgtactactacttccaggtcgggggg
aacatcttcgacagcatcattgtggcaatcagcctgatggagctgtggctggccgacgtc
gagggtctttccgtgcttcgctccttccgtctgatgcgtgttttcaagcaggccaaatcc
tggcccacactcagcatgacaatcaagatcatcggtaattcagtgggcaccctagttaac
atcactctggttctggccatcatcatcttcatgtttgccgtggggggcatgcagctcttc
ggcaagagctacaaagagtgtgtctgcaagatctccttggactgcatgctgcctcgctgg
cacatggatgacttcttccacgctcttctcatcatcttccgggcgctgtgcggagagtgg
atcgagaccatgtgggattgcatggaggtggccggacagggcatttgtctcgtcttcttc
atgatggtcatggtcatcggtaaactagtggtgttgaacctcttcttgacctttctgctg
agctcgttcagccgttacaacctggcggctccagaggaggacggggagatgaacaacctg
cagatcgccaccagcaggattaccaggggcatggactgggccaaggcatacatcatcaag
cagttctgcattatcataggcaaccagcctaaggaggatggagatggggctgacggtaat
gggggtagtaatggggatgtggacggcctcccaaaggacagcttggctttgaaaaatata
aattccagtgacaacccaaaggctgatttggagctcaaaatgctggacgatgttaaccca
agtggatttcttgcaaatgcgaatttgaccctgaatgtacctattgccaaaatggagtct
gatgatgatgaggatgacagttctgacgtgaaaggaaaaggcacaaatgaggatgctaag
cgaaggaaacctattgcacaggacaatgcctctttgatctgcaggacaagtgtggaagtg
gagaaagaagaggcaaaccccaccagccctgagaactgctggactgcgacatgtattgga
cgatgcccttgccttgattgtgacatcaccacagggaaaggaaaaacttggtggaacttc
aggaagacatgcttcctcattgtggaacacaactactttcagtcctttatcatcttcatg
atcctaatgagtagtggagctttggcttttgaagacatacacattgaacagcgcaggact
ataaaagtcatcctggaatatgctgatcaagtcttcacctacgtgttcattattgagatg
ctcttgaagtgggtggcttacggattccaggcctacttcacaaatgcatggtgctggctg
gacttcctcattgtgaatgtgtctatgattggtttaacggctaacatcctgggctacgct
gaacttgggtcaatcaaatctcttcgaaagttacgggctttgcggcccctccgtgccctg
tccagatttgagggaatgaaggtggtggtgaacgctctggtgggggccattccttccctt
gtcaatgtgcttctagtgtgcgtcaccttctggctcatcttcagcatcattggagtcaac
ctgtttgctgggaagtactactactgcttcaataccacgtctgaggagatgttctctgct
gacattgtgaacaacaggtccgaatgcgtccaactaatagagggtaatgccgacgtacgc
tggatgaactcaaagatcaactttgacaacgtggccataggctacctttccctcctgcaa
gtagcaacatttaaaggatggctgggtatattgtatggcgctgtggattcacgtatggtg
ggagagcaacccatgtatgaggataatgtttacatgtccatctactttgtcatgttcatc
atctttgggaccttcgtcatgctgaatctcttcattggtgtcattatcgacaacttcaac
cagcaaaaaaagaagtttggagggaaaaatattttcatgacagaggaacagaataaatac
tacaatgccatgaaaaagcttggttccaagaagctacagaaacccattcctagacccaag
aacaaattcgcaggcattatttatgacctgatcacccaacaattcttcgaggtcttcatt
attgtgctgatctgcctcagcatggtaacgatgatggtggacacggatgaccagagcgag
gagaaggatagcatcctcttcttcatcaacctggtgtttatcttcatcttcatcgcagag
tgtatcctcaagttgatcggattgcggcaatattattttaccgtcggatggaatatttta
gattttgtcgtcgtcattctctccatccttggtttactgctggcggacctcatagagaag
tattttgtctcacctacccttttccgtgtcgtaagactggccaggattggtcgagttctg
agactcatccgaggagctcaaggcatccggacactgttgttttccctgaggatgtcactt
ccagctatcttcaacattgggctcctgttcttcctcatcatgtttatcttctccattttt
ggaatgtccaactttgcgtatgtcaaaaaggagtccggaatagacgatatgatcaatttt
gaaacttttggcaacagtatcatttgtctgttcatgatcacaaccttagccggttgggac
agtgtcctctcacccatgatgagtagtacacctccgaactgtgacccgtacattgaaaat
ccaggcacaaatgtaagaggcaactgcagcagccctggttggggaattctttttatctgc
agctacatcatcatgtgtttctttcttgtggtcaacatgtacattgccgttattctcgag
aacttcaatgttgtcatcgaggagagcggcaacccgctgtgtgaggaagactttgagatg
ttctatgagacctgggagaagttcgaccctgacgcgtcacaattcatcgcctacaacatt
ttgtcggagttctgtgacacgcttaaagacccgctcaggatccccaaacccaacgcaatc
aagctgatcaccatggaccttcccattgtccctggggataagatccactgtctggacatc
ctgctggctctgaccacagaggtgctgggagaatcaggggagatggatgccatgaaggag
agcatggaggagaagttcatggccaaaaaaccctttaaagtgtcattcaagccaatcacc
accaccctgaggcgaaagcaggaggaggtagcagctgttgttattcagagagcctattgt
aagcatctgctgagaagttcgatgaaactcgcttcccacaagtaccatgagaagaaagag
ttaaccaaggaggacgaagcgccgccagagcaggaaggaatgattgccatcagaatgagc
aaactgtatgaaagccaacaatcactcggggtggatgaaaccgttgtagatatggattct
tatgtaaaactggagagaaaagaactgacagcgacacaacctcctgtggtgactactgaa
acgccgccgcatgtggagcttcagaacgagatcatctcgcactctgccccctttgtcatc
ccggcctcaacccataactcacagctgaaagagtcccatgtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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