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KEGG   Oncorhynchus keta (chum salmon): 118376974
Entry
118376974         CDS       T09424                                 
Name
(RefSeq) desmin-like isoform X1
  KO
K07610  desmin
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118376974
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oke04812]
    118376974
Cytoskeleton proteins [BR:oke04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     118376974
SSDB
Motif
Pfam: Filament Filament_head DUF7491 Mis14 TolA_bind_tri DUF4200 CCDC92 Baculo_PEP_C WXG100 DUF1664
Other DBs
NCBI-GeneID: 118376974
NCBI-ProteinID: XP_052348686
Position
34:2300596..2340920
AA seq 565 aa
MSKSFSSQSAQSASSYRRTFGSGIGSTPGMSSMFSHGGRGSSGSSGSTHMSSRVYEMTKS
SARPSYSSGSIRSSSGGAMRSYAGMGEKLDFSLADATNRDFLDTRTNEKAELQHLNDRFA
SYIEKVRFLEQQNATLVVEIERLRGHEPTRVAEMYEEEMRELRRQVDGMSNDRARMEVER
DNLADDLQKLKLRLQEEIHQKEEAENNLSAFRADVDSATLARLDLERRIESLQEEIAFLK
KIHEEEIHELTSQIQETSVQVQMDMSKPDLTAALRDIRMQYEGIAAKNISEAEDWYKSKV
TDLNQAVNKNNDALRQAKQESMEFRHQIQSYTCEIDSLKGTNESLLRQMREMEDRLGNEA
GGYQDSITRLEDEIAKMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITVSG
SHSAAHSAAHSASHSAAHSAASSYSTIGFRETSPDVGRSSEVHSKKTVLIKTIETRDGEE
SPFETLSLLEESPISQKKKKKKKAAEKTRWSVNLHSTSRTSCKQQQTYKRSNNKFKGRLH
TKIQGLLSVAFLGKASFERSLFERE
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgagcaagtccttctcctcccagtctgcccagtcagcctcttcctaccgccggaccttc
ggttctggtattggttccaccccaggcatgtcctccatgttctcccacggtggacgtggc
tcctccggctcctccggctccacccacatgtcctccagagtctacgagatgaccaaaagc
tctgcccgccccagctactcctccggcagcattcgttcctcttccggcggcgcgatgcgc
tcgtacgccgggatgggcgagaagctggacttcagcttggccgacgccacgaaccgtgac
ttcctggacaccaggaccaatgagaaggcagagctgcagcacctgaacgaccggttcgcc
agctacatcgagaaggtccgtttcctggagcagcagaacgctactctggtggtggagatc
gagaggctgaggggtcacgagccgacccgcgtggccgagatgtacgaggaggagatgaga
gagctgaggcgtcaggttgacggcatgtccaatgacagagcccgcatggaagtggagaga
gacaacctggcagacgacctgcagaaactcaaactcagactgcaggaggagatccaccag
aaggaagaggcagagaacaacctgtctgccttcagagctgacgtggactctgccactctg
gccaggctggacctggagagacgcattgagagtctacaggaggagatcgccttcctcaag
aagatccacgaggaggagatccatgagctgacgagccagatacaggagacctcggtgcag
gtccagatggacatgtccaaaccagacctgaccgctgccctcagggacatccgtatgcag
tacgagggaatcgcagccaagaacatctccgaggcagaggactggtacaaatccaaggtg
acagacctgaaccaggctgtgaacaagaacaacgatgctctgagacaggccaaacaggag
agcatggagttcaggcatcagatccagtcctacacctgtgagatcgactctctcaaggga
accaatgagtctctgcttaggcagatgagggagatggaggatcgtctgggaaacgaggct
ggaggttaccaggactccatcacccgtctggaggatgagatcgctaagatgaaggatgag
atggctcgtcacctcagagagtaccaggacctcctcaatgtcaagatggccctggatata
gagatcgctacctacaggaagctactggagggagaggagagccgcatcactgtatctggc
tcccactctgctgctcactctgctgctcactctgcctctcactctgctgctcactctgct
gcctcatcatattccactattggattcagagagaccagcccagacgtagggcgttcatca
gaggtccactcaaagaagactgttctgatcaagaccatcgaaacccgcgatggagaggaa
agtccctttgagaccttgtctcttttggaagagagccctatctcacaaaaaaaaaaaaaa
aaaaaaaaagcagcagaaaaaacaaggtggtcagtgaatctacacagcaccagcaggaca
tcatgtaaacaacaacaaacatacaaacgaagcaacaacaagtttaaaggacgtttacat
accaagatacaagggctgctctcggtagcttttctagggaaagcctctttcgaaaggtct
ctttttgagagggagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (16)   

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