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KEGG   Oncorhynchus keta (chum salmon): 118365455
Entry
118365455         CDS       T09424                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:oke04040]
    118365455
Ion channels [BR:oke04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   118365455
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ IQCJ-SCHIP1 GPHH ATP-synt_B
Other DBs
NCBI-GeneID: 118365455
NCBI-ProteinID: XP_035603582
Position
3:6607952..6643885
AA seq 1780 aa
MFIMITILSNCFFMTMSDPPSWSKTVEYVFTGIYTFEASCKVLSRGFVVGPFTFLRDPWN
WLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALVQSVKKMVDVM
ILTVFALAVFALIGLQLFMGNLRNKCVRWPILNSTVFDDYNFTSSLDGTMGFDETSNSTV
PVDFKEYISNIENHYYLEGSLDALLCGNSSDAGKCPEGFTCIKAGRNPNYGYTSYDSFGW
AFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYDEQN
EATLKESQDKEEEFQRLLEQYRIQAQEQADAADGSQATLTSRKELSHHSGSYGGSADDEQ
SLGDDVIKDCNGRIVPRLAIVPVSSESESVPEDELKEDSMFHLEQPGLKNRSESAVSVLT
TVMEELEDAQKPCPPGWYKFADIFLKWDCCVPWVWLKKWLLFIVMDPFVDLGITICIVLN
TLFMAMEHYPMSPEFDHMLSVGNLVFTGIFTAEMVFKLCAMDPYYYFQVGWNIFDSIIVT
FSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIV
FIFAVVGMQLFGKSYKECVCKIATDCELPRWHMHDFFHSFLIVFRILCGEWIETMWDCME
VAGAGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSSDDDGEMNNLQIAIGRINWG
IDWVKASVRHMVLQLLGKKATGDKEGGEGIEGNPEKETFALNHLDTCQDSKMADGMTNCV
DGLQADGEMSLNVPIAQGETDFENDDDYSGSFTSDEENGQGDHLKLLGAVGDESSVCSTV
DYVPEPEPVEEEEEEEPEPEEPEACFTDGCISRWPCLTFDVSQGRGKKWWNLRRTCFTIV
EHDYFETFIVFMILLSSGALAFEDIYIERRRTIKIILEYADKVFTYVFIIEMLLKWVAYG
FKTYFTNAWCWLDFLIVDVSLVTLGANWMGYSELGPIKSLRTLRALRPLRALSRFEGMRV
VVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELFPITEVNNRSD
CLALQHATQEARWVNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREVEEQPSYEI
NLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDDIFMTEEQKKYHEAMKKLGS
KKPVKPIPRPTNMIQGAVFDFITQQFFDIFIMVLICLNMVTMMVETDDQSAEKENVLYKI
NLAFIVVFTGECLLKMFALRHYFFTIGWNIFDFVVVILSVAGIMLSDIIEKYFVSPTLFR
VIRLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVK
KQAGIDDIFNFQTFGSSIICLFEITTSAGWDGLLLPILNSGPPDCDPDIENPGSDVRGNC
GNPGMGIMFFCSYIIMSFLVVVNMYIAIILENFNTAQEESGDLLCEDDFVMFDETWEKFD
LEGTQFIEYAKLSEFCDTLQEPLRIAKPNRIKLISMDLPLVTGDKIHCLDILLAVTLEVL
GEGVEMTAMKVSIEAKFNMNNPTTDSYEPITTTLRRKEEEAAAVIIQRAYRKHLLKRSIL
HASFMRRSKRQKRWEENEEPPETEGLLVRKMNVLYGSDLDLAAEMELAGLHAQPISVPLV
SNRPSDLPKQTQTTRPEPGRPLLLVVPVEVTSEVVLHSAPVASDPPLDLPEQTQPSGSEP
TGLEPTWPEPAGPNLLVVPVEVTPYLCSRESIDSLRESIV
NT seq 5343 nt   +upstreamnt  +downstreamnt
atgttcatcatgattaccattctgtcgaactgcttttttatgacgatgagcgacccaccg
tcatggagtaaaactgttgagtatgtttttactggtatttatacctttgaggcctcatgc
aaagtgttgtcaagaggctttgttgtcggcccttttacattccttcgagatccatggaat
tggctggatttcatggtgatcagcatggcgtacgtcactgagtttgttgatctaggcaac
gtgtcagcccttaggacgttccgtgtactccgagcccttaaaaccatcactgtgattcct
ggattaaaaaccatcgtgggcgccctggtccagtctgtaaagaaaatggtagacgtgatg
atcctcactgtgttcgccctggccgtgtttgcgctcatcggcctgcaactcttcatggga
aatttgcgcaacaagtgtgtccggtggcccatcctcaactcaacggtgttcgacgattac
aacttcacctcgtcgcttgacggcaccatgggtttcgacgaaacatcaaattccactgtt
cccgtcgatttcaaggagtacatcagcaatatagagaaccactactatttggaaggtagt
ctggatgctcttctctgcggaaacagctctgatgctgggaagtgcccagaaggattcacg
tgcataaaggctgggaggaaccccaactacggctacaccagctacgactccttcggctgg
gccttcttgtccctcttcagactcatgacgcaggactactgggagaacctgttccaactg
acacttcgagcagcagggaagacgtacatgatcttctttgtgctggtcatcttcctgggt
tccttctacctcatcaacctcatcctggccgtggttgccatggcctacgacgagcagaac
gaggccactctgaaagagtcgcaggataaggaggaggagtttcagaggcttctggagcaa
tacagaatccaagctcaggagcaagctgatgctgctgatggaagtcaggcgaccctgaca
agtcggaaagagcttagtcatcactctgggtcatacgggggctctgcggatgacgagcag
agcctcggagatgatgtaatcaaggactgtaatgggagaatcgtgccccgtctggccatc
gttccagtgtcctctgagtcggagtcggttccagaggacgagctcaaagaggacagcatg
ttccatctggagcagccaggcctgaagaacagatcggagagtgctgttagtgttctcacc
accgtcatggaggagctggaagatgcccagaagccttgtccacccggctggtacaagttt
gccgacatcttcctgaagtgggactgttgcgtgccctgggtatggttgaagaagtggttg
ctctttattgtgatggaccccttcgtggacctaggcatcaccatctgcatcgtgctcaac
accctcttcatggccatggagcactaccccatgagcccagagtttgaccacatgctctcc
gtggggaacctggttttcactgggatcttcacagcagagatggtcttcaagctttgcgcc
atggatccgtattactacttccaggtcggctggaacattttcgacagtatcattgtcacg
ttcagtctggtggagttaggtctagccaatgtccaaggcctgtccgttctcaggtctttc
cgattgctgcgtgtcttcaaactagccaagtcgtggcccacgctcaacatgctgatcaag
attattggcaactctgtgggcgctctgggcaacctgaccttggtgctggccatcatcgtc
ttcatcttcgccgtggtgggcatgcagctctttggcaagagctacaaggaatgcgtgtgt
aagattgccaccgactgcgagttgccacgttggcacatgcacgacttcttccactcattc
ctcatcgtgtttcgcatcctgtgcggggagtggatcgagaccatgtgggactgtatggag
gtggccggagccgggatgtgcctggtggtcttcatgatggtcatggtcatcggaaacctg
gtggtgctgaacctcttcctggccttgctgctcagctcattcagtggagacaacctgtcc
agtgatgacgacggtgagatgaacaacctccagatcgccatcggcaggatcaactggggc
atcgactgggtgaaagcctctgtccgccacatggtcctgcagctactgggcaaaaaggcc
accggggacaaggaagggggtgaggggatcgaaggaaaccccgaaaaggagacctttgca
ctaaaccacttagacacgtgccaggattccaagatggccgacgggatgaccaactgtgtg
gacgggcttcaggcagatggcgagatgagcctcaatgtgcccattgcccagggggagact
gattttgagaacgatgatgactacagtgggtcttttacatcagatgaagaaaatggacaa
ggtgatcacttgaagttgttgggtgcagtgggtgacgagtcctcggtgtgcagcacggtg
gactatgtacctgaaccagaacctgtggaagaggaggaagaggaggagccagagccagag
gaaccagaagcttgcttcactgatggctgtatctctcgatggccatgtctgacttttgac
gtctctcagggcagaggcaagaagtggtggaacctccgcaggacctgtttcaccatcgtg
gaacacgactactttgagaccttcatagtcttcatgatcctcctaagcagtggagctctg
gcttttgaggatatttacattgagaggagaagaactatcaaaatcatcctggagtatgca
gacaaagtcttcacctatgtctttatcattgagatgctcttaaaatgggtggcgtacggc
ttcaagacctacttcaccaacgcttggtgttggctggacttcctaattgtggatgtttcc
ttagtcactttaggagctaactggatgggctactctgaacttggaccaatcaagtctctt
agaacactcagggctctaaggccacttcgagccctgtcaagatttgagggaatgagggtg
gtggtaaacgctcttgtcggcgccatcccctccatcttcaacgtgctgctggtgtgcctc
atcttctggctcatcttcagcatcatgggggtcaacctgtttgccggaaagttctaccgc
tgcatcaacaccaccacggaggagctgttccccatcaccgaggtcaacaacaggagcgac
tgccttgccctgcagcacgccacccaggaagcccgctgggtcaacgtcaaagtcaactac
gacaacgtgggcttgggctacctctctctgctgcaagtggccacatttaaaggctggatg
gacatcatgtatgctgctgtggactctcgagaagtggaggagcagccctcgtatgagatc
aacctctacatgtacatctactttgttatcttcatcatcttcggctccttcttcaccctc
aatcttttcattggtgtcattattgacaatttcaaccagcaaaagaaaaagtttggtgac
gacatctttatgacagaagagcagaagaaatatcatgaagccatgaagaaacttggctcg
aagaagccagtgaagcctatcccaaggcctacgaacatgattcaaggcgctgtgtttgac
ttcatcactcagcagttctttgacatcttcatcatggtcctcatctgcctcaacatggtc
accatgatggtggagacggacgaccaaagcgcagagaaggaaaatgtcctttacaagatc
aacctggccttcatcgtcgttttcaccggcgagtgtctgctcaagatgtttgcccttcgc
cattacttcttcaccatcggatggaatatttttgattttgtcgtggtcatcctgtccgtc
gcgggtataatgctgtcggacatcatagagaagtactttgtgtcacccaccttgtttagg
gtcatcaggctggctaggataggcagggtcctgcggctcatcaaaggtgccaagggcata
aggacgctgttatttgcgttgatgatgtcactccctgccctgttcaacatcggcctcctg
ctcttcctcatcatgttcatcttctccatattcggcatgtccaactttgcctacgtcaaa
aaacaggcgggcatcgacgacatcttcaatttccagacgttcggcagcagtattatctgc
ctgtttgagatcaccacctctgcgggttgggatggtcttctgctgccaattctaaacagc
ggtcctccagactgcgacccagacattgagaacccgggctcggatgttcgtggcaactgc
ggcaacccaggcatgggtatcatgttcttttgcagttacatcatcatgtccttcctggtg
gtggtcaacatgtacatcgccatcatcctggagaacttcaacacggcccaagaggagagc
ggagacctgctgtgcgaggatgactttgtgatgttcgacgagacctgggagaagttcgac
cttgagggcacgcagttcatcgaatacgccaagctgtcagagttttgtgacaccctgcag
gaacccctgcgtatcgccaagcccaaccggatcaagctgatctcaatggacctgcccctg
gtcacgggcgataagattcactgcctggacatcctgctggctgtcaccctggaggtgctg
ggcgaaggggtggagatgacggccatgaaggtgagcatcgaggccaagttcaacatgaac
aaccccacgactgactcctacgagcccatcaccaccacgctgcggcgcaaggaggaggag
gcagcagccgtgatcatccagcgggcataccgcaagcaccttctcaagcgctccatcctg
catgcctccttcatgcgccgctccaagaggcagaaaaggtgggaggagaacgaggagccc
ccggagacggagggacttctggtgcgaaagatgaacgtgctctatgggagcgacctggac
cttgccgcagagatggaattggctgggttgcatgcgcaacccatatcggtccctctggtg
tccaatcggccatcggacctccccaagcaaacccagaccaccaggccggagcctggcaga
ccactcctcttggtggtccccgttgaggtcaccagtgaggtggtgttacactcagcccct
gtggcgtctgacccaccattggacctccccgagcaaacacaaccatcggggtcggagccc
acagggctggaacctacctggccggagcctgctgggccaaacctcttggtggtccccgta
gaggtcaccccctatttgtgtagccgtgagtcaatagacagcctgcgagagtcgattgta
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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