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KEGG   Oncorhynchus gorbuscha (pink salmon): 124024603
Entry
124024603         CDS       T07892                                 
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like
  KO
K08524  retinoid X receptor alpha
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03320  PPAR signaling pathway
ogo04148  Efferocytosis
ogo04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    124024603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ogo03000]
    124024603
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ogo03310]
    124024603
Transcription factors [BR:ogo03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    124024603
Nuclear receptors [BR:ogo03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   124024603
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 124024603
NCBI-ProteinID: XP_046194454
Position
Unknown
AA seq 431 aa
MSSHQPTSSASNSPTSTFGSPFSVISPSLGSPGVAPSMGYGPISSSQINSTMGMHSISSS
DDVKPPFGLRPMSAHSPGIMLSQKRMCAICGDRSAGKHYGVYSCEGCKGFFKRTVRKDLS
YTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQKSVQEERQRIREREEGLE
CSSAVNEEMPVEKILEAETSVEQRAELHSDTGSAGSSPHDAVTNICQTADKQLFALVEWA
KRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGVLLANELHRDNAHSAGVAAI
FDRESVQSAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDAKGLSNTGEVEL
LREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFL
MEMLEAPHQLA
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtcatcgcatcagcccaccagttcagcctccaacagtcccaccagcacctttggctcg
cctttctcagtcatcagcccctcactgggctcccctggtgtggcaccctccatgggttat
gggcctattagcagtagccagatcaactctacaatggggatgcactcaatcagcagctcg
gatgatgtcaaacccccgtttggcttgaggcctatgtctgcacacagccctgggataatg
ctctcccagaaacgcatgtgtgccatctgtggagaccgctccgcaggtaagcactatggt
gtgtacagctgtgaaggttgcaagggcttcttcaaacgcacagtgcgcaaggacctgagc
tacacctgcagggataacaaagaatgcctggtggacaagcgccagcgcaatcgctgccag
tactgtcgctaccagaagtgtctggctatgggcatgaagagggaagtggtccaagatgaa
cgtcagaaatcagtccaggaggagcgtcagaggatcagggagcgagaggagggactggag
tgcagcagtgctgtgaacgaggagatgcccgtggagaagatcttggaggcagagacgtcc
gtggagcagagggcggagctccactctgatacaggctccgctggtagctctcctcatgat
gcggtgacaaacatctgccagaccgcagacaagcagctgtttgcgttggtggagtgggcc
aagaggatccctcacttctctgagctgcccctggacgaccaggtcatcctcctgcgtgca
gggtggaatgaacttctgatcgcctccttctcacaccgctccatcgctgtgaaggacggg
gtcctgctggccaatgagctacaccgggacaacgcacacagtgcaggggtggcggccatc
tttgacagggagagtgtgcagagtgctgaggtgggagccatatttgaccgggttctcact
gagctggtcagtaagatgagagacatgcagatggacaagacagagctgggctgcctccga
gccatcgtcctcttcaacccagacgctaaaggtctgtccaacaccggagaggtggagctc
ctgagagagaaggtctatgcgtcactggaagcctactgcaagcagaaataccccgagcag
cagggaaggtttgctaagctcctcctcaggctgccagcactgcgttctattggcttgaag
tgtttggagcacctgttcttcttcaagctgattggtgacacccctatcgacacgttcctc
atggaaatgcttgaagcacctcatcagttggcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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