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KEGG   Octopus bimaculoides (California two-spot octopus): 106868437
Entry
106868437         CDS       T04127                                 
Name
(RefSeq) retinoic acid receptor RXR isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:obi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    106868437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:obi03000]
    106868437
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:obi03310]
    106868437
Transcription factors [BR:obi03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    106868437
Nuclear receptors [BR:obi03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   106868437
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 106868437
NCBI-ProteinID: XP_014769193
Position
1:complement(155080671..155621351)
AA seq 477 aa
MVANRKPTETESSLYGLWIPSITDTLDSSMPSVSSMPLNSPPDIKPDISSLTPTSSHGHY
FGFGHGMPPQMPASVPSAMPSLPTSLHSNMSSLGSNHISSQGHMHSPPLQSPPSSSLGSP
PMMSLSPGSASSPPHMSGSFSSKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTY
ACRDDRNCIIDKRQRNRCQYCRYMKCLAMGMKREDVSRQGKERDFKAVQEERQRVKEKGE
GEVESTSSANVDMPVERILEAELAVEPKIETYIDTQKDPVTNIFQAAEKQLFTLVEWAKR
IPHFTKLSLDDQVTLLRAGWNELLIAGFSHRSIPVKDGILLATGIHVHRSSAHHAGVGTI
FDRVLSELVAKMREMKMDKSELGCLRAIVLFNPDAKGLVSTQEVESLREKVYASLEEYCK
CQYPEETGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPSPQT
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggtggctaaccgcaaacccacggaaactgagagtagtctctacggcttatggattccc
agtattacagatactttggacagctctatgccgtctgtcagttctatgccactgaactct
ccacctgacataaaaccagacatatcctccctaacaccgactagttcacatggacattac
tttggatttggacatggcatgccccctcaaatgcctgcatcagttccttcggcgatgccc
tctttaccaacttcgttacattcaaatatgtcatcattgggctcaaaccacatttcctca
cagggtcacatgcattcgcctccattacaatccccaccttcgtccagcctagggtcgcca
cctatgatgtcacttagtcctggttcagccagctcaccacctcatatgtctggctctttc
tccagcaagcatatttgcgccatatgtggagaccgagcatccggtaaacactacggtgtt
tatagttgtgaaggctgtaaagggttcttcaagagaactgtgcggaaagaccttacttat
gcttgccgtgatgacagaaactgtatcattgacaaacggcaaagaaatcgatgtcagtat
tgtcgttatatgaaatgtttggctatgggaatgaaacgagaagatgtgtcaagacagggg
aaagaacgagactttaaagctgttcaagaagaacgtcaacgtgtgaaagaaaaaggagaa
ggcgaagtagagagcaccagcagtgcaaatgttgatatgcctgttgaacgaatcttagaa
gctgaattagctgtagaaccaaagatagaaacatatattgacacccagaaggatccggtg
accaatatctttcaggctgctgagaaacagctttttactctggtcgaatgggccaaacga
attccccactttactaaattgtctcttgatgatcaagtgacattgttgagggcaggctgg
aatgagttgctaattgctggtttctctcatcgttctatacctgtcaaagacggtatcttg
ttagccactggcattcatgttcatcgaagtagtgcacaccatgctggtgtaggtactatt
tttgacagagttctttctgaactggtagccaaaatgcgggaaatgaagatggataaatca
gaattaggatgtttacgagcaatagtgctcttcaaccctgatgctaaaggcctagtttca
acacaagaagttgaatctctgagagaaaaggtttatgctagtttagaagaatattgcaaa
tgccaatacccagaagaaactggccgctttgccaaactgttattgcgtttgcctgcactg
agaagcattggactaaagtgtctggagcacttatttttcttcaaacttataggggacact
ccaattgatacattcttgatggaaatgttagaaactcccagtcctcaaacatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (2)   
   Pfam (2)   
All databases (89)   

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