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KEGG   Numida meleagris (helmeted guineafowl): 110406787
Entry
110406787         CDS       T06015                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
nmel  Numida meleagris (helmeted guineafowl)
Pathway
nmel03320  PPAR signaling pathway
nmel04148  Efferocytosis
nmel04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    110406787 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nmel03000]
    110406787 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:nmel03310]
    110406787 (RXRA)
Transcription factors [BR:nmel03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    110406787 (RXRA)
Nuclear receptors [BR:nmel03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   110406787 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3 CRT10
Other DBs
NCBI-GeneID: 110406787
NCBI-ProteinID: XP_021269361
Position
16:7093113..7168027
AA seq 467 aa
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggacaccaaacacttcctgccactggatttctcaaaccaagtcaattccacatccctg
aactccccgacgagccgaggccccatggccaccccatccctgcacccgtccattgggccg
ggcatcggctcctcgctgggctccccgggccagctgcactcgcccatcagcaccctgagc
tcgcccatcaacggcatggggccacccttctccgtcatcagctcccccatgggcccgcac
tcgatgtctgtcccctccacacccagcctgggattcggcaccagcagcccgcagctcaac
tcacccatgaaccccgtcagcagctcagaagatatcaagccacccctggggctcaacgga
gtcctcaaagtgccagcacatccctcaggaacaatggcctccttcaccaagcacatatgt
gccatctgcggggacagatcttcaggtaaacattacggggtgtacagctgcgagggctgc
aaaggcttcttcaagcgcacggtgcggaaggacctgacctacacctgccgcgacaacaag
gactgcttgatcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgt
cttgccatggggatgaagcgggaagctgtgcaggaggagaggcagcgggggaaagaccgc
aacgagaacgaagtggagtccacaagtagcgccaacgaggacatgcccgtggagaagatc
ctggaagcagaactcgctgtggagccaaagacagagacgtacattgaggcaaacatgggc
ctgacgccgagctcgcccaacgacccggtgacgaacatttgccaggcggccgacaagcag
ctcttcaccctggtggagtgggccaagaggatcccccatttctcggagctgcccctggat
gaccaggtcatcctgctgcgagcagggtggaacgagctcctcatcgcctccttctcccac
cgctccatagcagtgaaggacgggatcctgctggccactgggctgcacgtgcaccgcaac
agcgcgcacagcgccggcgtcggggccatcttcgacagagtactgacagagctcgtgtca
aagatgcgagacatgcagatggacaagacagagctgggctgcctgcgagccatcgtcctc
ttcaaccccgactcaaaaggtctctccaacccggctgaagtggaggcgttacgggagaag
gtgtacgcgtcgctggaggcgtactgcaagcacaaataccccgaccagcccgggaggttc
gccaagctcctgctccgcctgccagccctgcggtccatcggcctcaaatgcctggagcac
ctcttcttcttcaagctaataggcgacacgcctatcgacaccttcttgatggaaatgctg
gaagcgccccatcaaatgacttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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