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KEGG   Numida meleagris (helmeted guineafowl): 110399575
Entry
110399575         CDS       T06015                                 
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
  KO
K06238  collagen type VI alpha
Organism
nmel  Numida meleagris (helmeted guineafowl)
Pathway
nmel04510  Focal adhesion
nmel04512  ECM-receptor interaction
nmel04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110399575 (COL6A2)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110399575 (COL6A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nmel04147]
    110399575 (COL6A2)
   00536 Glycosaminoglycan binding proteins [BR:nmel00536]
    110399575 (COL6A2)
Exosome [BR:nmel04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110399575 (COL6A2)
Glycosaminoglycan binding proteins [BR:nmel00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   110399575 (COL6A2)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   110399575 (COL6A2)
SSDB
Motif
Pfam: VWA Collagen VWA_2
Other DBs
NCBI-GeneID: 110399575
NCBI-ProteinID: XP_021254177
Position
5:complement(34219336..34246590)
AA seq 1015 aa
MFQQALLSTLLCMALVPLHAQFDDEPVTSCTEKTDCPISVYFVIDTSESIALQTVPIQSL
VDQIKQFIPRFIEKLENEVYQNQVSITWMFGGLHYSDVVEIYSPLTRSKDTYLTKLRAIK
YLGRGTFTDCAISNMTQQFQGQTARDVKFAVVITDGHVTGSPCGGMKMQAERARDMGIKL
FAVAPSEDVYEQGLREIASPPHDLYRSNYTITPKDALHIDENTIERIIKAMKHEAYAECY
KMSCLEITGPAGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGVPGLKG
EKGEIGSDGRRGAAGLAGRNGTDGQKGKLGRIGPPGCKGDRGDKGPDGYPGDAGDQGERG
DEGMKGDPGRPGRSGPPGPPGEKGSLGIPGNPGAQGPAGSKGRKGETGPPGPKGEPGRRG
DPGTKGSKGGPGTKGERGDPGPEGPRGLPGEVGNKGARGDQGLPGPRGPTGAVGEPGNIG
SRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGELGPKGA
QGTKGEKGEPGDPGPRGEPGSRGPTGEAGPEGTPGPPGDPGLTDCDVMTYVRETCGCCDC
EKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSETGARVGVVQYSH
EGTFEAIKLDDERINSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRREKAQVFA
VVITDGRYDPRDDDKNLGALCGRDVLVNTIGIGDIFDQPEQSETLVSIACNEPQRVQKMR
LFSDLVAEEFIDKMEDMLCPDPQIVCPELPCQTELAVAQCTQRPVDIVFLLDGSERIGEQ
NFHRAHHFVEEVAQQLTLARSNNDNMNARIALLQYGSEREQNVVFPLTYNLTEISSALAQ
IKYLDSSSNIGSAIIHAINNIVLSPGNGQRVARRNAELSFVFITDGITGSKNLEEAINSM
KKQDVMPTVVALGSDVDMDVLLKLGLGDRAAIFREKDYESLSQPSFFDRFIRWIC
NT seq 3048 nt   +upstreamnt  +downstreamnt
atgttccaacaagcccttctatctactcttctttgcatggctctagtacctctccatgct
cagtttgatgatgaacctgttacctcctgtacagaaaagacagattgccccatcagtgtg
tacttcgtcattgacacctcagagagtattgctttgcagactgtgcctatccagagcctt
gtggatcaaataaagcagttcatcccgcgattcattgaaaaactggagaatgaggtatac
cagaaccaagtctccatcacttggatgtttggaggacttcattactcagatgtggtggaa
atttacagccctttaacaagaagcaaggacacatacctcaccaagctccgtgctattaag
taccttggccggggcaccttcacggactgtgctatctccaacatgacacagcaattccag
ggccagacagcccgcgatgtgaagtttgcggtggtcatcactgatggacatgtcactggc
agcccttgtgggggaatgaagatgcaagctgagagggcacgtgacatggggataaagctc
tttgccgtggcccccagtgaggacgtctatgagcagggcctgcgggaaattgccagtcca
ccacatgacctgtaccgcagcaactacaccatcacaccgaaagacgccctgcacattgat
gagaacactatcgagaggataatcaaagcgatgaaacatgaagcctatgctgagtgctac
aagatgagctgcctggagattacaggtccagctggtcccaagggataccgagggcagaag
ggtgcaaagggaaacatgggagaaccaggctcccctggactgaagggacggcagggtgac
ccaggtattgaaggtccaatcggatatcccggtcccaagggtgttccagggctgaaagga
gaaaagggcgagattggatccgatggacggcggggcgcagctggtttggcaggcaggaat
ggcaccgatggccagaagggcaagctggggagaattggaccaccaggctgcaagggagat
cgcggtgacaagggccctgatggctacccaggagatgcaggagaccaaggtgaaagagga
gatgaaggcatgaagggagatcctggccgacctggtcgcagtggacccccaggacctcca
ggagaaaaagggagcctgggaattcctggcaaccctggagctcaaggacctgctggaagc
aaaggaagaaaaggtgaaacaggacctcctggacccaaaggagagcctggtcgacgtgga
gatccagggacgaagggcagcaaaggcggtccagggaccaagggagaaagaggagatcct
ggtccagagggtccccgtggcctgcctggtgaggttggaaacaaaggagcaaggggagac
caaggattgccaggaccccgaggccctacaggtgctgtgggagagccaggcaatatcgga
tcacgtggggaccctggagacttgggcccaagaggtgacgcgggaccaccaggaccaaag
ggtgatagaggcaggcctggcttcagctaccctggacccagaggaccgcagggtgacaag
ggtgagaaggggcagccagggcccaagggaggaaggggtgagcttggaccaaaaggagca
caagggacaaaaggagagaagggggaaccgggtgatcctggcccaagaggtgaacctggc
tcccgaggcccaactggcgaagcaggcccagaggggacccctggcccaccaggagatcct
ggcctgactgactgcgatgtgatgacatatgtgagagagacgtgcggatgctgtgactgt
gagaagcgctgcggtgccctggatatcatgttcgtcatagacagctcagagagtattggt
tacaccaacttcactctggagaaaaattttgttgtaaacgtggtcagccggctgggctcc
atcgccaaggaccccaaatcagagacaggtgcccgtgttggggtggtacagtacagtcac
gaggggacctttgaagccatcaagcttgatgatgagcgcatcaattcgctgtcaagcttc
aaagaagcagtaaagcgcctggagtggattgctggaggcacctggacaccttctgctctt
cagtttgcttacaataagctcatcaaagaaagccgtcgagagaaagcccaagtgtttgct
gtggtgatcacagatgggcgttatgaccctcgggatgatgacaagaacttaggggctctt
tgtggcagagatgtgcttgtcaacaccattggcattggagacatatttgatcagccagaa
cagagtgagaccctagtctccattgcctgcaatgaacctcagcgagtccagaagatgagg
ctcttctcagaccttgtggcagaggaattcatagacaagatggaggacatgctctgccca
gatccacagattgtctgccctgagctaccctgtcagacagagcttgcagtagcccagtgc
acacagcgccctgttgacattgtcttcttgctcgatggctctgaaagaattggggagcag
aatttccacagggctcaccactttgtggaggaggttgcccaacagcttacactggccagg
agcaacaatgacaacatgaatgcccggattgcactgctgcagtacggcagtgagagagag
cagaacgtggtcttcccactgacctacaacctaacagaaatctccagtgccctggctcag
atcaagtacctggactcatcctccaacattgggtcagctatcatacatgccatcaacaac
attgtgctcagccctggaaatggtcagcgagtcgctcggcgcaatgctgaactctccttc
gtcttcatcactgatggcatcacaggaagcaagaaccttgaggaggccatcaattccatg
aagaagcaagatgtcatgcccacggtagtggctcttgggagtgatgtagacatggatgtc
ctgctgaagcttggccttggagatagggctgctatctttcgggagaaggactatgaaagc
ctctcccagccaagcttcttcgacaggttcattaggtggatatgttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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