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KEGG   Neogale vison (American mink): 122917108
Entry
122917108         CDS       T08764                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
nvs  Neogale vison (American mink)
Pathway
nvs03320  PPAR signaling pathway
nvs04148  Efferocytosis
nvs04151  PI3K-Akt signaling pathway
nvs04659  Th17 cell differentiation
nvs04919  Thyroid hormone signaling pathway
nvs04920  Adipocytokine signaling pathway
nvs04928  Parathyroid hormone synthesis, secretion and action
nvs04932  Non-alcoholic fatty liver disease
nvs04976  Bile secretion
nvs05160  Hepatitis C
nvs05200  Pathways in cancer
nvs05202  Transcriptional misregulation in cancer
nvs05207  Chemical carcinogenesis - receptor activation
nvs05216  Thyroid cancer
nvs05222  Small cell lung cancer
nvs05223  Non-small cell lung cancer
nvs05226  Gastric cancer
nvs05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    122917108 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    122917108 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    122917108 (RXRA)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    122917108 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    122917108 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    122917108 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    122917108 (RXRA)
   05202 Transcriptional misregulation in cancer
    122917108 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    122917108 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    122917108 (RXRA)
   05216 Thyroid cancer
    122917108 (RXRA)
   05222 Small cell lung cancer
    122917108 (RXRA)
   05223 Non-small cell lung cancer
    122917108 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    122917108 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    122917108 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    122917108 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nvs03000]
    122917108 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:nvs03310]
    122917108 (RXRA)
Transcription factors [BR:nvs03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    122917108 (RXRA)
Nuclear receptors [BR:nvs03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   122917108 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 122917108
NCBI-ProteinID: XP_044120464
Position
9:1801173..1892876
AA seq 439 aa
MAAPSLHPSLGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTP
ALGFGTGSPQLSSSMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPRTETYVDANMGLNPNSPND
PVTNICQAADKQLFTLVEWAKRVPHFSELPLDDQVILLRAGWNELLIASFSHRSITVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggccgccccctcgctacacccctccctgggcccgggcatcggttcctctctcggctcc
ccgggacagctgcactcgcccatcagcaccctgagctcccccatcaacggcatgggcccg
cccttctccgtcatcagctcccccatgggcccccactccatgtcagtgcccaccacgcct
gccctgggcttcggcacgggcagcccccagctcagctcatccatgaaccccgtcagcagc
agcgaggacatcaagccccccctgggcctcaatggtgtcctcaaagtcccggcccacccc
tcagggaacatggcgtccttcaccaagcacatctgtgccatctgtggggaccgctcctca
ggcaagcactacggggtctacagctgcgagggctgcaagggcttcttcaagcggacggtg
cgcaaggacctgacctacacatgccgcgacaacaaggactgcctgatcgacaagcggcag
cggaaccgctgtcagtactgccgctaccagaagtgcctggccatgggcatgaagcgggaa
gccgtacaggaggagaggcagcggggcaaggacaggaacgagaacgaggtggagtccacg
agcagcgccaacgaggacatgccggtggagaagattctggaggcggagctggctgtcgag
cccaggaccgagacgtacgtggacgcgaacatggggctgaaccccaactcgcccaacgac
cccgtcaccaacatctgtcaggccgcggacaagcagctcttcacgctggtcgagtgggcc
aagcgggtcccgcacttctctgagctgcccttggacgaccaggtcatcctgctgagggca
ggctggaatgagctgctcatcgcctccttctcccaccggtccatcaccgtgaaggacggg
atcctcctggccaccgggctgcacgtccaccggaacagcgcccacagcgcaggggtgggc
gccatctttgacagggtgttgacggagctcgtgtccaagatgcgggacatgcagatggac
aagacggagctcggctgcctgcgcgccatcgtcctcttcaaccccgactccaaggggctt
tcgaacccggcagaggtggaggcgctgcgagagaaggtgtacgcgtccctggaggcctac
tgcaagcacaagtacccagagcagccgggaaggttcgccaagctgctgctgcgcctgccg
gccctgcgctccatcggcctcaagtgcctggaacatctcttcttcttcaagctcatcggg
gacacgcccatcgacaccttcctcatggagatgctggaagccccccaccaaatgacttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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