Entry |
|
Name |
(RefSeq) syntaxin-43-like
|
KO |
|
Organism |
msyl Malus sylvestris (European crab apple)
|
Pathway |
msyl04130 | SNARE interactions in vesicular transport |
|
Brite |
KEGG Orthology (KO) [BR:msyl00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
126593298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:msyl04131]
126593298
Membrane trafficking [BR:msyl04131]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
126593298
|
SSDB |
|
Motif |
|
Other DBs |
|
Position |
12:complement(27830844..27834140)
|
AA seq |
324 aa
MATRNRTLVFRKYRDALKSVRAPTSSYASPSTSSGGGPVIELVSTSLLNPNRNYAPLSTE
DPGNSSRGALTVGLPPAWVDLSEEIAANVQRARVKMAELTKAHAKALMPSFGDGKEDQRL
IESLTQEITNLIRKSEKTLQRLSAAGPFEDSNVRKNVQRSLATDLQTLSMDLRKKQSTYL
RRLRQQTEGQDGDDLEMNLNGSTSRMDGDDLDDMMFNERQMAKIKKNEAVTAEREREIQQ
VVQSVNELAQIMKDLAVLVIDQGTIVDRIDYNIQNVASTVDEGLKQLQKAERTQKQGGMV
MCASILVIMCFVMLVLLILKEIFF |
NT seq |
975 nt +upstreamnt +downstreamnt
atggcgacgaggaatcggaccttggttttcaggaagtatagggatgcgttgaagagcgtc
cgcgctcccacgagctcctacgcttcgccatctacgagctccggtggcggtccggtcatt
gaattggtcagcacttcgcttttgaatcccaaccggaattatgccccgctcagtactgag
gatcccggtaattcaagtcgtggtgcacttactgttggtctaccgccagcatgggtggat
ctatctgaagagatagcagcaaacgtgcagcgtgcacgggtaaaaatggctgagctaact
aaggctcatgcaaaggctttaatgccttcttttggagacggtaaagaagatcaacgcttg
attgagagtcttacgcaagagataacgaatttgataaggaaatctgagaagacactacag
agactttctgcagctgggccttttgaagattcaaatgttagaaaaaatgtgcagcgatct
cttgccactgaccttcaaaccctctcaatggaccttcgcaagaaacagtcaacttatttg
aggcgactcaggcagcaaacagagggtcaagatggggatgatttagagatgaacctaaat
ggaagtacgtcgagaatggatggtgatgatttggatgacatgatgtttaatgagcgtcag
atggccaagataaagaaaaacgaggcagtcacagcagaaagggaaagagagatccaacag
gttgtgcaatctgtgaatgagcttgctcagataatgaaggatttggcagtactagtgata
gaccagggaactattgttgataggatagactacaacatccagaatgtagcaagtacagtc
gatgagggcctcaagcaattgcaaaaggctgagagaacacagaaacaagggggaatggtg
atgtgtgctagcatactcgttatcatgtgctttgtcatgttggtcctcctaatcctcaag
gagatattcttttga |