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KEGG   Micropterus salmoides (largemouth bass): 119897768
Entry
119897768         CDS       T07309                                 
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03320  PPAR signaling pathway
msam04148  Efferocytosis
msam04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:msam00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    119897768 (rxrbb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msam03000]
    119897768 (rxrbb)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:msam03310]
    119897768 (rxrbb)
Transcription factors [BR:msam03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    119897768 (rxrbb)
Nuclear receptors [BR:msam03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   119897768 (rxrbb)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 119897768
NCBI-ProteinID: XP_038567632
Position
Unknown
AA seq 444 aa
MSSQQPNSSASNSPTNILGSPFSVISPSLNSPVVSPSLGFGPISNSQISSSAPISGMHSI
SSSEDIKPPFGLRPMPAHSPGLMLSQKRMCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVIKHVKWIKEDGKDEGWMTVQE
ERQRNREREGELEFSVGVNEEMPVEKILEAETAVEQKTELHSDGGSAGNSPHDAVTNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGVLLASEL
QRDSAHSAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNP
DAKGLSNTSEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtcctcacagcagcccaacagttcagcctccaacagccccaccaacatcttgggttct
cctttctcagttatcagtccatcactcaactcccccgtggtctccccctctctgggattt
ggacccatcagcaacagtcagatctcttcttcagcacccatatcagggatgcactcaata
agcagctcagaagatatcaagcccccgtttggcctcaggcccatgccagctcacagccct
ggactaatgttgtctcagaaacgcatgtgcgttatctgtggggaccgctcttctggcaag
cactatggagtgtacagctgtgagggctgcaaaggtttcttcaaacgaactgtgcgcaaa
gacctgagctatacctgcagggataacaaagagtgcctggttgacaaacgccagcgcaat
cgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagagggaagtgatc
aaacatgtaaagtggataaaagaagatggaaaagatgagggatggatgacggtccaggag
gagcgccagaggaacagagagcgcgaaggagagctggagttcagtgtcggagtgaatgag
gagatgcctgtggagaagattttagaggcagagactgctgtggagcagaagaccgaactt
cactctgatggcggttctgcaggcaactctccccatgatgcagttaccaacatctgccag
actgcagacaaacagctttttgccttggtggagtgggcaaagagaatcccccatttctcc
gaactgccccttgatgaccaggtcatcctcctgcgtgcagggtggaatgagctcctcatc
gcctcgttctcccatcgctccattgctgtgaaggatggcgttctcctggcctctgagctg
cagcgagacagtgcacacagtgcaggagttggagccatttttgacagggagagtgtgcag
agtgcagaggtcggcgccatatttgaccgggtccttacggagcttgtcaataaaatgaga
gatatgcaaatggacaaaacagagctgggctgcctccgagccattgtcctcttcaaccca
gatgctaaagggctctccaacaccagtgaggtggagctccttagagaaaaggtctatgca
tcattggaagcttactgcaaacagaaatacccagagcagcagggaaggtttgctaagctc
cttcttcgactgccagcactgcgatccattggcttgaagtgcttggagcatctcttcttc
ttcaagttaatcggtgacacgcctattgacactttcctcatggaaatgcttgaagctccc
catcagttgtcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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