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KEGG   Mastomys coucha (southern multimammate mouse): 116077761
Entry
116077761         CDS       T07224                                 
Symbol
Scn4a
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mcoc04040]
    116077761 (Scn4a)
Ion channels [BR:mcoc04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   116077761 (Scn4a)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel GPHH IQ Lustrin_cystein
Other DBs
NCBI-GeneID: 116077761
NCBI-ProteinID: XP_031208391
Position
Unknown
AA seq 1855 aa
MASSSLPTLVPPGPHCLRPFTPESLAAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSII
RRVAIKVLIHALFSMFIMITILTNCVFMTMSNPPSWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNDTNITWYGNDTW
YGNDTWYSNDTWYGNDTWNSQESWASNSTFDWEAYINDEGNFYFLEGSNDALLCGNSSDA
GHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKHQEELEKAK
AAQALEGGEEADGDPTHNKDCNGSLDTSGEKGPPRPSCSADSAISDAMEELEEAHQKCPP
WWYKCAHKVLIWNCCAPWVKFKHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHF
DNVLSVGNLVFTGIFTAEMVLKLVAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLS
VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSY
KECVCKIASDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVM
VIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKTFLLGLLHG
KILSPKDIMLSLGEPGAAGENGESTPEDEKKEPPPGDGDKELKDNHILNHVGLTDGPRSS
IEMDHLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDIKGSLGTQDSHAPWSPQ
KPLQPLYDGNSSVCSTADYKPPEEDPEEQAEENPEGELPEECFTEACVKRCPCLYVDISQ
GRGKMWWTLRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKV
FTYIFILEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTL
RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCIN
TTTSERFDISVVNNKSECESLMYTGQVRWMNVKVNYDNVGLGYLSLLQVATFKGWMDIMY
AAVDSREKEEQPDYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIF
MTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDISIMILICLNMVTMM
VETDDQSQLKVDILYNINMVFIIIFTGECVLKMFALRHYYFTIGWNIFDFVVVILSIVGL
ALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFL
VMFIYSIFGMSNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPP
DCDPTLENPGTNIKGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEP
LSEDDFEMFYETWEKFDPDATQFIDYSRLSDFVDTLQEPLKIAKPNKIKLITLDLPMVPG
DKIHCLDILFALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCA
IKIQRAYRRHLLQRSVKQASYMYRHSQDGNGDGAPEKEGLLANTMNKMYGSEKEDNGVQS
QGEEKKSSTEDAGPTTEVTPTSSSDTALTPPPPPPPPSSPSQGQTVRPGVKESLV
NT seq 5568 nt   +upstreamnt  +downstreamnt
atggccagctcatctctgcccaccctggtccccccgggtccccactgcctgcgtcccttc
accccagagtccctggcagccatagagcagcgggcagtggaggaggaggcccggctgcag
cggaacaagcaaatggagattgaggagcctgagcggaagccacgcagtgacctggaagct
ggcaagaacctcccactcatctatggggaccccccacctgaagtcattggcatcccccta
gaggacctggacccttactacagtgacaagaagaccttcattgtgctcaacaaaggaaag
gccatcttccgattctctgccacccctgccctctacatgctgagccccttcagcatcatc
cggcgggtggctatcaaggtgctcatccacgcgctgttcagcatgtttatcatgatcacc
atcttgaccaactgcgtgttcatgaccatgagcaacccgccttcttggtccaaggacgtg
gagtacaccttcacagggatctacacctttgagtccctcattaagatgctggcccgaggc
ttctgcattgatgacttcacattcctccgagacccctggaactggctggatttcagtgtc
atcactatggcatatgtgacagagtttgtggacttgggcaacatctcagccctgaggacc
ttccgtgtgctgcgggccctgaaaaccatcactgttatcccagggctgaagacgatcgtg
ggagccttgatccagtctgtgaaaaaactgtcggatgtgatgatcctcactgtcttctgc
ctgagtgtcttcgccctggtggggctgcagcttttcatgggaaacctgcgtcagaagtgc
gtgcgttggcccccacccatgaatgacaccaacatcacgtggtatggcaatgatacgtgg
tatggcaacgatacatggtacagcaatgacacatggtatggcaatgacacttggaacagc
caggagagctgggccagcaactctacctttgactgggaggcctacatcaatgatgaaggg
aacttctatttcttggagggttccaatgatgccctgctctgtgggaatagcagcgatgcc
gggcactgccccgagggctacgagtgcataaaggctgggcggaaccccaactatggctac
accagctacgacaccttcagctgggccttcctggctctcttccgtctcatgacacaggac
tactgggagaaccttttccagctgacccttcgagcagctggcaagacctacatgatcttc
ttcgtggtcatcatcttcctgggttccttctacctcatcaatttgatcctggcggtggtg
gccatggcgtacgctgagcagaatgaggctaccctggccgaagaccaggagaaagaggag
gagttccaacagatgcttgaaaaatttaaaaaacatcaggaggaactggaaaaggccaag
gctgcccaggctctggaaggtggagaggaggcagatggggacccaacccacaacaaagac
tgcaatggtagcctggatacatccggggagaagggacccccgaggccaagctgcagcgca
gacagtgccatctcagatgctatggaggagctggaagaggcccatcagaagtgcccccca
tggtggtacaagtgtgctcacaaagtgctcatctggaactgctgtgccccgtgggtgaag
ttcaaacatataatccacctgatcgtcatggacccctttgtggacctgggcatcaccatc
tgcatcgtgctcaacaccctcttcatggccatggagcactaccccatgaccgagcacttt
gacaatgtgctctctgtgggcaacttggtcttcaccggcatcttcactgcagagatggtg
ctgaagctggtagccatggacccctacgagtatttccaacagggctggaacatcttcgac
agcttcatcgtcaccctcagcctggtggagctgggcctggccaacgtacaggggctatca
gtgctccgttctttccgtctgctgcgtgtcttcaagctggccaagtcatggccaacactc
aacatgctcatcaaaatcattggcaactcagtgggcgcactgggcaacctgacactggtg
ttggccatcatcgtcttcatcttcgctgtggtgggcatgcagctgtttggcaagagctat
aaggaatgtgtgtgcaagattgcctcagactgtagcctgccccgctggcacatgcacgat
ttcttccactccttcctcatcgtcttccgcatcctctgtggggaatggatcgagaccatg
tgggactgcatggaggtggctggccaagccatgtgcctcactgtcttcctcatggtcatg
gtcattggcaacctggtggtcctgaatctgttcttggctctcctgttgagctccttcagt
gctgacagcctggcagcatcagatgaagatggcgagatgaataacctgcagatcgccatt
gggcgtatcaagtggggcatcggctttgccaaaaccttcctcctggggctgttgcatggc
aagatcctgagccccaaggacataatgctcagcctcggcgagcccggggctgctggggaa
aatggggagagcacacccgaggatgagaagaaggagccgcccccgggagatggggacaag
gagctgaaagacaatcatatcctgaaccatgtgggcctgactgatggcccccgttccagc
atcgagatggaccaccttaacttcatcaacaacccctacctcaccatccaggtgcccatt
gcctcggaggagtcagacctggagatgcctacagaggaagagactgacaccttctcagaa
cctgaggacatcaagggatctcttggaacccaagactcacatgccccgtggtccccacag
aagccactacagcccctctacgacgggaactcctctgtctgcagcacggctgactacaag
cccccggaagaggaccctgaggagcaagctgaggagaaccctgaaggggagctgcctgag
gaatgcttcacggaggcctgtgtgaagcgctgcccttgcctctatgtggacatctcccag
ggccgtgggaaaatgtggtggacactgcgcagggcctgtttcaagattgttgagcacaac
tggtttgagaccttcattgtcttcatgatcttgctcagcagtggagccctggccttcgag
gacatctacattgagcagcggcgagtcatccgtaccatcctagaatacgctgacaaggtc
ttcacctacatcttcatcctggagatgctgctaaagtgggtggcctatggcttcaaggtg
tatttcaccaacgcctggtgctggctcgatttcctcattgtggacgtctccatcatcagc
ctggtggctaactggctgggttactctgagctggggcccatcaaatccctgcgcacgctc
cgggcccttcgacctctgagggcattgtcccgatttgagggcatgagggtggtggtgaac
gccctcctgggagccatcccctccatcatgaatgtgctccttgtctgcctcatcttctgg
ctcatcttcagcatcatgggggtcaacttgtttgctggaaagttctactactgcatcaac
acaaccacctctgagagattcgacatctctgtggtcaacaacaagtccgagtgtgagagc
ctcatgtacacaggccaggtccgctggatgaacgtcaaggtcaactacgacaacgtgggt
ctgggctatctctccctccttcaggtggccactttcaaaggttggatggacatcatgtat
gcagctgtggactcccgggagaaagaggagcagccagactatgaggtgaacctctatatg
tacctttacttcgtcatcttcatcatcttcggctccttcttcacccttaacctcttcatc
ggcgtcatcattgacaacttcaaccaacagaagaagaagtttggaggaaaagatatcttc
atgacagaggaacagaagaaatactacaacgcgatgaagaagcttggctctaagaagccc
cagaagccaattccccggcctcagaacaagatccagggcatggtgtacgacttcgtgacg
aagcaggtgtttgacatctccatcatgatcctcatctgcctcaacatggttacaatgatg
gtggagacggatgaccagagccagctcaaggtggacatcctgtataacatcaacatggtc
ttcattatcatcttcacaggggagtgtgtgctgaaaatgtttgccctacgccattactac
ttcaccattggctggaatatcttcgactttgtggttgtcatcctgtccattgtgggcctt
gcgctctctgacttgatacagaaatactttgtgtcacccacactgttccgagtgatccgc
ttggctcggatcgggcgtgtcttgcgtctgatccgtggggccaagggcatccggacgctg
ctgttcgccctgatgatgtccctgcctgccctcttcaacatcggcctcctcctctttctg
gtcatgttcatttactccatcttcggcatgtctaacttcgcctatgtcaagaaagagtca
ggcatcgacgacatgtttaactttgagacctttggcaacagtatcatctgcctcttcgag
atcactacgtctgctggctgggacgggcttctgaaccccatccttaacagtgggccccca
gactgtgacccgacactggagaacccgggtaccaatatcaagggtgactgcggcaaccca
tccatcggcatctgtttcttctgcagctacattattatctccttcctcatcgtggtcaat
atgtacattgctatcatcctagagaatttcaatgtggccactgaagagagcagtgagcct
ctcagtgaggatgactttgagatgttctacgagacctgggagaagtttgaccccgatgcc
actcagttcatcgactacagccgcctttctgactttgtggacaccctgcaggagcccctg
aaaatcgccaagcccaataagatcaaacttatcacattagatctgcccatggtacccggg
gacaagatacactgcctggacatcctctttgccctgaccaaagaggtactgggtgactct
ggggaaatggatgccctcaagcagaccatggaagagaagtttatggcagccaatccctcc
aaggtctcctatgagcccatcaccaccaccctcaagaggaagcaggaggaggtgtgtgct
atcaaaatccagagagcctaccgccgccacctgctgcagcgctctgtaaagcaggcctcc
tacatgtaccgccacagccaggatggcaatggcgatggggccccagagaaggagggattg
cttgccaacaccatgaacaagatgtatggctctgaaaaagaggacaacggtgtgcagagc
cagggggaggaaaagaagagctctacagaggatgctggacccaccacggaggtcacaccc
accagcagctcggatactgccctgactcctcctcctcctccacccccaccatcatcacca
tcacaagggcagacagtgcgcccaggggtcaaagagtctcttgtctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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