[go: up one dir, main page]
More Web Proxy on the site http://driver.im/

Direct observation of the oxidation of DNA bases by phosphate radicals formed under radiation: a model of the backbone-to-base hole transfer

Phys Chem Chem Phys. 2018 May 30;20(21):14927-14937. doi: 10.1039/c8cp00352a.

Abstract

In irradiated DNA, by the base-to-base and backbone-to-base hole transfer processes, the hole (i.e., the unpaired spin) localizes on the most electropositive base, guanine. Phosphate radicals formed via ionization events in the DNA-backbone must play an important role in the backbone-to-base hole transfer process. However, earlier studies on irradiated hydrated DNA, on irradiated DNA-models in frozen aqueous solution and in neat dimethyl phosphate showed the formation of carbon-centered radicals and not phosphate radicals. Therefore, to model the backbone-to-base hole transfer process, we report picosecond pulse radiolysis studies of the reactions between H2PO4˙ with the DNA bases - G, A, T, and C in 6 M H3PO4 at 22 °C. The time-resolved observations show that in 6 M H3PO4, H2PO4˙ causes the one-electron oxidation of adenine, guanine and thymine, by forming the cation radicals via a single electron transfer (SET) process; however, the rate constant of the reaction of H2PO4˙ with cytosine is too low (<107 L mol-1 s-1) to be measured. The rates of these reactions are influenced by the protonation states and the reorganization energies of the base radicals and of the phosphate radical in 6 M H3PO4.

MeSH terms

  • Base Sequence
  • Cytosine / chemistry
  • DNA / chemistry*
  • Free Radicals / chemistry
  • Kinetics
  • Oxidation-Reduction
  • Phosphates / chemistry*
  • Thermodynamics

Substances

  • Free Radicals
  • Phosphates
  • Cytosine
  • DNA