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vwa8 von Willebrand factor A domain containing 8 [ Cheilinus undulatus (humphead wrasse) ]

Gene ID: 121522391, updated on 22-Mar-2024

Summary

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Gene symbol
vwa8
Gene description
von Willebrand factor A domain containing 8
See related
EnsemblRapid:ENSCUDG00000019477
Gene type
protein coding
RefSeq status
MODEL
Organism
Cheilinus undulatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Cheilinus
Orthologs
human zebrafish all
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Genomic context

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See vwa8 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
46
Annotation release Status Assembly LG Location
100 current ASM1832078v1 (GCF_018320785.1) 15 NC_054879.1 (22768049..22869273, complement)

Linkage Group 15 - NC_054879.1Genomic Context describing neighboring genes Neighboring gene coagulation factor V Neighboring gene regulator of cell cycle Neighboring gene diacylglycerol kinase, eta Neighboring gene A kinase (PRKA) anchor protein 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054879.1 Chromosome 15 Reference ASM1832078v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
von Willebrand factor A domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cheilinus undulatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1832078v1 Primary Assembly

Genomic

  1. NC_054879.1 Reference ASM1832078v1 Primary Assembly

    Range
    22768049..22869273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041806697.1 → XP_041662631.1  von Willebrand factor A domain-containing protein 8 isoform X1

    Related
    ENSCUDP00000051612.1, ENSCUDT00000052347.1
    Conserved Domains (4) summary
    TIGR02640
    Location:412 → 655
    gas_vesic_GvpN; gas vesicle protein GvpN
    COG0714
    Location:759 → 849
    MoxR; MoxR-like ATPase [General function prediction only]
    COG5271
    Location:433 → 527
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00057
    Location:1711 → 1900
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  2. XM_041806698.1 → XP_041662632.1  von Willebrand factor A domain-containing protein 8 isoform X2

    Related
    ENSCUDP00000051550.1, ENSCUDT00000052281.1
    Conserved Domains (4) summary
    TIGR02640
    Location:324 → 567
    gas_vesic_GvpN; gas vesicle protein GvpN
    COG0714
    Location:671 → 761
    MoxR; MoxR-like ATPase [General function prediction only]
    COG5271
    Location:345 → 439
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl00057
    Location:1623 → 1812
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

RNA

  1. XR_005992966.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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