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vwa8 von Willebrand factor A domain containing 8 [ Oreochromis aureus ]

Gene ID: 116310487, updated on 18-Jun-2024

Summary

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Gene symbol
vwa8
Gene description
von Willebrand factor A domain containing 8
See related
Ensembl:ENSOABG00000011088
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis aureus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Orthologs
human zebrafish all
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Genomic context

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See vwa8 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
45
Annotation release Status Assembly LG Location
101 current ZZ_aureus (GCF_013358895.1) 16 NC_052957.1 (31206373..31299432, complement)
100 previous assembly ASM587006v1 (GCF_005870065.1) Unplaced Scaffold NW_022246357.1 (110077..194163, complement)

Linkage Group 16 - NC_052957.1Genomic Context describing neighboring genes Neighboring gene coagulation factor V Neighboring gene regulator of cell cycle Neighboring gene diacylglycerol kinase, eta Neighboring gene A kinase (PRKA) anchor protein 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
von Willebrand factor A domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis aureus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZZ_aureus Primary Assembly

Genomic

  1. NC_052957.1 Reference ZZ_aureus Primary Assembly

    Range
    31206373..31299432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031727287.2 → XP_031583147.2  von Willebrand factor A domain-containing protein 8

    UniProtKB/TrEMBL
    A0A668TBK0
    Related
    ENSOABP00000024515.2, ENSOABT00000025228.2
    Conserved Domains (3) summary
    COG5271
    Location:156 → 899
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam07728
    Location:97 → 253
    AAA_5; AAA domain (dynein-related subfamily)
    cl00057
    Location:1710 → 1899
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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