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Vwa8 von Willebrand factor A domain containing 8 [ Octodon degus (degu) ]

Gene ID: 101574966, updated on 8-Mar-2024

Summary

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Gene symbol
Vwa8
Gene description
von Willebrand factor A domain containing 8
See related
Ensembl:ENSODEG00000006290
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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See Vwa8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
45
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524698.1 (1305448..1746744, complement)

NW_004524698.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein C pseudogene Neighboring gene ornithine decarboxylase antizyme 1 pseudogene Neighboring gene catenin alpha-1-like Neighboring gene nuclease-sensitive element-binding protein 1 pseudogene Neighboring gene uncharacterized LOC111812364 Neighboring gene ubiquitin-60S ribosomal protein L40 pseudogene Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524698 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
von Willebrand factor A domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524698.1 Reference OctDeg1.0 Primary Assembly

    Range
    1305448..1746744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023700137.1 → XP_023555905.1  von Willebrand factor A domain-containing protein 8

    UniProtKB/TrEMBL
    A0A6P6D7T3
    Related
    ENSODEP00000008427.1, ENSODET00000008553.1
    Conserved Domains (3) summary
    pfam07728
    Location:54 → 210
    AAA_5; AAA domain (dynein-related subfamily)
    cl00057
    Location:1622 → 1811
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl21455
    Location:393 → 536
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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