GreenPhyl species, genomes and pan-genomes
GreenPhylDB is a web resource designed for comparative and functional genomics in plants.
The version 5.1 contains now a catalogue of clusters / gene families combining 19 pangenomes (e.g. rice, maize, banana, grape, cacao) and 27 reference genomes for a total of 46 species as illustrated on the right.
All clusters are functionally annotated with InterPro, Uniprot and NCBI and provide the following information:
- Species composition
- Cluster sublevel structure
- Protein domain specificity
- Plant kingdom specificity