A practical guide to evaluating colocalization in biological microscopy

KW Dunn, MM Kamocka… - American Journal of …, 2011 - journals.physiology.org
… how the various methods used to measure colocalization differ in their sensitivity to these
two components, and how this factor should be considered in choosing a colocalization metric. …

A guided tour into subcellular colocalization analysis in light microscopy

S Bolte, FP Cordelières - Journal of microscopy, 2006 - Wiley Online Library
colocalization analysis. Furthermore, we discuss the application and feasibility of colocalization
tools for various biological colocalization … for subcellular colocalization analysis under …

Recent advances in quantitative colocalization analysis: focus on neuroscience

V Zinchuk, O Grossenbacher-Zinchuk - Progress in histochemistry and …, 2009 - Elsevier
… of publications employing colocalization experiments and citing colocalization observations.
… results of their colocalization experiments. Importance of colocalization observations can be …

Colocalization of fluorescent markers in confocal microscope images of plant cells

AP French, S Mills, R Swarup, MJ Bennett… - Nature protocols, 2008 - nature.com
This protocol describes the steps needed to perform quantitative statistical colocalization on
two-color confocal images, specifically of plant cells. The procedure includes a calibration …

[HTML][HTML] Automatic and quantitative measurement of protein-protein colocalization in live cells

SV Costes, D Daelemans, EH Cho, Z Dobbin… - Biophysical journal, 2004 - cell.com
… We introduce here a novel statistical approach that automatically quantifies colocalization in
any … does not imply actual colocalization. This definition of colocalization also requires that …

A guide to accurate fluorescence microscopy colocalization measurements

JWD Comeau, S Costantino, PW Wiseman - Biophysical journal, 2006 - cell.com
… In this work, we present a comparison of colocalization measurements using spatial ICCS
and automatic determination of the colocalization coefficients, M1 and M2 as a function of the …

Statistical tests for measures of colocalization in biological microscopy

JH McDonald, KW Dunn - Journal of microscopy, 2013 - Wiley Online Library
Colocalization analysis is the most common technique used for quantitative analysis of
fluorescence microscopy images. Several metrics have been developed for measuring the …

Combining evidence from Mendelian randomization and colocalization: Review and comparison of approaches

V Zuber, NF Grinberg, D Gill, I Manipur… - The American Journal of …, 2022 - cell.com
… randomization estimate but lack evidence for colocalization. These include the existence of
… As colocalization was developed in the GWAS tradition, typically evidence for colocalization

Quantitative colocalization analysis of confocal fluorescence microscopy images

V Zinchuk, O Zinchuk - Current protocols in cell biology, 2008 - Wiley Online Library
… This unit describes a protocol for quantitative evaluation of images with colocalization
presence or absence of colocalization are given. Success in colocalization studies depends on the …

EzColocalization: An ImageJ plugin for visualizing and measuring colocalization in cells and organisms

W Stauffer, H Sheng, HN Lim - Scientific reports, 2018 - nature.com
colocalization). Here we describe an open source plugin for ImageJ called EzColocalization
to visualize and measure colocalization … multiple metrics to measure colocalization for two or …